Transcript Information: S_Transcript_478543.p1


Annotated TAIR IDAT1G47980.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17691985-17693818 | Reverse length=315
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7676827279379
Replicate 20.42428441456759
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.65376379547156
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_478543.p1 GENE.S_Transcript_478543~~S_Transcript_478543.p1 ORF type:internal len:104 (+),score=0.56,Ferritin_2|PF13668.2|2.3e-18 S_Transcript_478543:1-309(+)
GTGACCGGCACCGACATCCTCAACTTTGCGCTCCAGCTGGAGTGCCTCGAGGGCGAGTTCTACTCGTGGGCGGCCTTTGGCGAGGGCCTCTCGCCTGAGCTGCTTGCTGGCGGGCCGCCCAGCATCGGCGGCCGCAAGGCCAACCTTACCGCCACCACACAGGAATACGCGGTCGAGATTGCCAACGACGAGATCAACCACGTTGCGTTCCTGCGCGCCGCGCTTGGCGACGCCGCCGTGCCATGCCCCAAGATGGATGTTGGCCCCGCCTTTGCGGCCGCTGCCGCCGCCGCCGCGGGCGTCGAGTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_478543.p1 GENE.S_Transcript_478543~~S_Transcript_478543.p1 ORF type:internal len:104 (+),score=0.56,Ferritin_2|PF13668.2|2.3e-18 S_Transcript_478543:1-309(+)
VTGTDILNFALQLECLEGEFYSWAAFGEGLSPELLAGGPPSIGGRKANLTATTQEYAVEIANDEINHVAFLRAALGDAAVPCPKMDVGPAFAAAAAAAAGVES

Click here to download the sequence:
Link to NCBI Protein BLAST