Transcript Information: S_Transcript_478627.p1


Annotated TAIR IDAT4G18450.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10190250-10191161 | Reverse length=303
E-Value8.1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14006842755358
Replicate 20.11611994503955
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.11774657178804
Replicate 30.22437734321033
Condition 3: 24 Hour
Replicate 10.11497307100313
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_478627.p1 GENE.S_Transcript_478627~~S_Transcript_478627.p1 ORF type:3prime_partial len:190 (+),score=30.62,AP2|PF00847.16|1.1e+04,AP2|PF00847.16|6.7e-13 S_Transcript_478627:24-590(+)
ATGGCTATTGGAAATATGGAAGACCAAAATGACAAAGCACAAGAAGGTATCCTAGAGAATGTTTGGGCAAACTACATAGGAGAACCAAATCAACAATTTGGAGGAAGTTTTATACCAAGTTATTCCAAAGATTGGCAAGGGATTCCTTCTTTAGAGGAAGGGGTTAGTGGATCAACAAACATGCTACAAAGGTTACCAAGCCTAGGGAGATGGATGTCAATGGGTTCCGAGACTTGGGAAGAACTCCTCAATTCAAGCTTAGACTCTATCAACAACAATAATACTGACCCAAAACAAGAAATTAGCGCGAAAAATTCAAGGCAACCAATGGAGAGATCGGCTCAAAAGATGCCTACACGACATTATAGAGGGGTTAGAAGACGACCCTGGGGCAAGTATGCAGCTGAGATAAGAGACTCTACTAAGAAAGGAGCCCGAGTTTGGCTTGGAACCTTTGATACAGCTGAAGAGGCTGCCTTGGGTTATGACAAGGCAGCCTTAAGAATTAGAGGGGCAAAAGCTTACTTGAACTTCCCATTGGAAACCACCACGAATAAGGACTTAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_478627.p1 GENE.S_Transcript_478627~~S_Transcript_478627.p1 ORF type:3prime_partial len:190 (+),score=30.62,AP2|PF00847.16|1.1e+04,AP2|PF00847.16|6.7e-13 S_Transcript_478627:24-590(+)
MAIGNMEDQNDKAQEGILENVWANYIGEPNQQFGGSFIPSYSKDWQGIPSLEEGVSGSTNMLQRLPSLGRWMSMGSETWEELLNSSLDSINNNNTDPKQEISAKNSRQPMERSAQKMPTRHYRGVRRRPWGKYAAEIRDSTKKGARVWLGTFDTAEEAALGYDKAALRIRGAKAYLNFPLETTTNKDLG

Click here to download the sequence:
Link to NCBI Protein BLAST