Transcript Information: S_Transcript_47880.p6


Annotated TAIR IDAT5G06530.2
Annotated Gene NameABC-2 type transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1990060-1994605 | Reverse length=751
E-Value2.2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5294828296081
Replicate 24.5647150808651
Replicate 33.60375302783
Condition 2: 8 Hour
Replicate 12.9414331471908
Replicate 20.5142953710282
Replicate 32.4500974258599
Condition 3: 24 Hour
Replicate 16.2772653708604
Replicate 25.4705752080838
Replicate 33.4789026765677


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47880.p6 GENE.S_Transcript_47880~~S_Transcript_47880.p6 ORF type:complete len:87 (-),score=7.37,ABC_tran|PF00005.23|2.6e-11 S_Transcript_47880:6067-6327(-)
ATGGTTCTCTTTCATGCTAGAGTAAATGTAAATGTACATGATATAACAGGATCTGTGAATCCCGGGGAAGTGCTTGCTTTAATGGGCCCTTCAGGTAGCGGAAAGACAACGCTGCTGAATCTGCTCGGAGGGAGGTTAAGTCAGACAGCAGTAGGTGGATCAGTCACATACAATGACAAACCATTCTCAAAGTTCCTCAAAAGCAGGCAAGCAGAACAGTTTTTGGTTGACGAGCTATCCTGTTTATATATCTTTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47880.p6 GENE.S_Transcript_47880~~S_Transcript_47880.p6 ORF type:complete len:87 (-),score=7.37,ABC_tran|PF00005.23|2.6e-11 S_Transcript_47880:6067-6327(-)
MVLFHARVNVNVHDITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSQTAVGGSVTYNDKPFSKFLKSRQAEQFLVDELSCLYIFP*

Click here to download the sequence:
Link to NCBI Protein BLAST