Transcript Information: S_Transcript_478810.p1


Annotated TAIR IDAT5G15630.1
Annotated Gene NameCOBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
Annotated Gene Symbol(s)COBL4, IRX6
Annotation TypeOrtholog
Chromosome Positionchr5:5084842-5086545 | Forward length=431
E-Value5.3E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93790312723103
Replicate 20.58315743323828
Replicate 30.97494640089518
Condition 2: 8 Hour
Replicate 10.84550005662642
Replicate 20.1971087985879
Replicate 30.56341447414048
Condition 3: 24 Hour
Replicate 10
Replicate 20.89856521668338
Replicate 30.55555163887921


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_478810.p1 GENE.S_Transcript_478810~~S_Transcript_478810.p1 ORF type:complete len:227 (+),score=22.20,COBRA|PF04833.11|2e-65 S_Transcript_478810:254-934(+)
ATGAGGTTGCCTATTTTATCATTGTGCTTTGTGGCAATTCTCTCTTATGCAGCTGCGTATGATCCCCTAGATCCAACCGGAAACGTTACAATCAAATGGGATGTTATGCAATGGACCCCTGACGGCTATGTGGCAACAGTGACAGTAAACAACTTCCAAATTTATCGGCACATAGGAAGCCCAGGATGGCAAATGGGCTGGACATGGGCCAAGAAGGAAGTGATATGGTCAATGGCGGGGGCCCAAACAACAGAGCAAGGGGACTGCTCCAAGTTCAAAGGCAACATCCCACATTGCTGCAAGAAGACCCCAACAGTTGTGGATCTCCTGCCAGGGGTGCCTTACAACCAACAGTTCTCCAACTGCTGCAGGGGAGGGGTGCTCTCAGCTTGGGGTCAGGACCAATCAGCCTCAGTGGCTCAATTCCAGATAAGTGTCGGTCAGGCCGGGACCTCGAACAAGACTGTTAGGGTGCCCAAGAACTTCACCTTGTTGGGCCCTGGCCCTGGCTACACCTGTGGCCCTGCTAAGGTTGTGCCCTCCACCAATTTCCTCACCCCTGATCATCGTCGCAAAACTCAGGCCTTGAGTAAGTCCTACCAACTAACATTAGTGCCATTTTTATGTTGTTCGTGCCAGATGAAACAAGAGTCCATATATAGAAGCGACAGTTTAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_478810.p1 GENE.S_Transcript_478810~~S_Transcript_478810.p1 ORF type:complete len:227 (+),score=22.20,COBRA|PF04833.11|2e-65 S_Transcript_478810:254-934(+)
MRLPILSLCFVAILSYAAAYDPLDPTGNVTIKWDVMQWTPDGYVATVTVNNFQIYRHIGSPGWQMGWTWAKKEVIWSMAGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCRGGVLSAWGQDQSASVAQFQISVGQAGTSNKTVRVPKNFTLLGPGPGYTCGPAKVVPSTNFLTPDHRRKTQALSKSYQLTLVPFLCCSCQMKQESIYRSDSLV*

Click here to download the sequence:
Link to NCBI Protein BLAST