Transcript Information: S_Transcript_47883.p1


Annotated TAIR IDAT1G06820.1
Annotated Gene Namecarotenoid isomerase
Annotated Gene Symbol(s)CRTISO, CCR2
Annotation TypeOrtholog
Chromosome Positionchr1:2093145-2096220 | Reverse length=595
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3755122834838
Replicate 210.839695975335
Replicate 310.896656074671
Condition 2: 8 Hour
Replicate 117.788003297703
Replicate 220.958145724104
Replicate 318.554552970529
Condition 3: 24 Hour
Replicate 111.560878308608
Replicate 29.129971488102
Replicate 311.873885043799


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47883.p1 GENE.S_Transcript_47883~~S_Transcript_47883.p1 ORF type:complete len:633 (+),score=130.78,Amino_oxidase|PF01593.20|2.9e-20,NAD_binding_8|PF13450.2|4.6e-12,FAD_binding_2|PF00890.20|6.9e-06,FAD_binding_2|PF00890.20|6.6,FAD_binding_2|PF00890.20|3.4e+02,DAO|PF01266.20|3.5e-05,DAO|PF01266.20|19,Pyr_redox_2|PF07992.10|0.00012,Pyr_redox_2|PF07992.10|17,Pyr_redox_2|PF07992.10|9.2e+02,GDI|PF00996.14|0.037,GDI|PF00996.14|0.031 S_Transcript_47883:206-2104(+)
ATGCAGTTCATATCCTCTTCCCCAATTTATTCTCCATCTCTCAACTTCAATAATCTTGCTGTTCATCCCTTTTCTGAACAATTCAGACCAAGAAACAGTACCCAATTGGGTTTGCCTAAACCCATAAAGCAAAAACACAAGTGGGTTCTTTTTGGCTCACTGGAATTAGGGTTTTGTGACTCAAAGGGTTTAAGGCAATGTGAAAATCATAGAGTTGTTTCTAATGTAAATGGTGGGGATGATAGAAGGGATATGAGAATTGTGGGTAGGGCAGGAGCTGTGATGAGTGTAGATGAAACAGTGGGGAAAGGAAAGAGTGATGGGGAAAGTTATGATGCAATTGTCATTGGCTCTGGTATTGGTGGATTAGTTGCTGCAACTCAGCTTGCTGTTAAGGGAGCCAAGGTTTTGGTTTTGGAGAAGTATGTCATTCCTGGAGGAAGCTCTGGGTTTTACGAGAGGGATGGTTATACATTCGATGTTGGATCGTCTGTCATGTTCGGTTTCAGTGACAAGGGTAATCTGAACTTAATCACTCAAGCATTAGAGGCAGTGGGACATAGGATGCAAGTCATACCAGATCCAACCACTGTCCATTTTCACTTACCAAATAACATTTCTGTTCGAGTGCATAAGGAGTATGAGGACTTCATCGCAGAACTGACTTCTAAATTTCCCCATGAGAAGGAAGGCATCTTCAAATTTTATGGAGAGTGTTGGAAGATATTCAATGCCTTGAACTCATTGGAGCTCAAGTCACTTGAGGAACCACTCTATCTTTTCGGGCAGTTCTTTCAGAAGCCTCTTGAATGTTTGACGCTTGCGTACTATTTACCTCAAAATGCTGGAGCAATTGCTCGAAAGTATATTAAGGATCCTGAGTTATTGTCTTTCATAGATGCTGAGTGTTTCATTGTCAGCACTGTTAATGCTATGCAGACTCCTATGATCAATGCTAGTATGGTTCTATGTGATAGGCATTTTGGAGGGATCAACTATCCTATTGGCGGTGTTGGTGGGATTCCTAAATACCTTGCCCAAGGTTTGGTTGATCATGGGAGCAAAATACTTTACAAAGCTAATGTGACTAACATCATTATGGATCAAGGGAAAGCTGTTGGGGTGAAGCTGTCTGATGGAAGGAAATTTTATGCCAGAACCATCATATCAAATGCAACTAGATGGGATACTTTTGGAAAGCTTTTGAAAGATGAGAAGCTCCCGAAAGAAGAGGAAAATTTTCAGAAATTATATGTCAAGGCTCCATCTTTTCTTTCTATACACATGGGGGTCAAAGCTGAGGTCTTGCCGCCAGATACAGATTGCCACCATTTTATTCTGGAGACTGACTGGAATAATTTAGAAGAGCCTTATGGTAGTATATTTTTGACCATTCCCACTGTACTTGATTCTTCATTGGCCCCTGAAGGACACCATATTCTCCACATATTTACAACGTCTTCTATTGATGACTGGCAGGGATTGTCTCCAGAAGACTACAGGACAAAGAAGGAACTTATAGCTGATGAAATCATAAGCAGATTAGAGAAGAAAATGTTTCCAGGGCTTAAATCTTCCATCATGCTTAAGGAGGTTGGGACTCCAAAAACACACAGGCGTTACTTGGCTCGTGATAATGGGACATACGGACCTATGCCGCGTGCAGTCTCAAAAGGCTTACTGGGGATGCCATTCAATACTACGGCTATAGATGGTCTCTACTGTGTTGGTGATAGCTGTTTTCCAGGACAAGGGGTCATAGCTGTGGCGTTTTCTGGAGTAATGTGTGCTCATCGGGTGGCTGCTGACATCGGGATCTTTGGAGCAGGTTTTTGGGGTCTTTGGGGAATCTTGGGTGTGCATGTCTTCTGTTATGGAATTCCTACAGACTCACTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47883.p1 GENE.S_Transcript_47883~~S_Transcript_47883.p1 ORF type:complete len:633 (+),score=130.78,Amino_oxidase|PF01593.20|2.9e-20,NAD_binding_8|PF13450.2|4.6e-12,FAD_binding_2|PF00890.20|6.9e-06,FAD_binding_2|PF00890.20|6.6,FAD_binding_2|PF00890.20|3.4e+02,DAO|PF01266.20|3.5e-05,DAO|PF01266.20|19,Pyr_redox_2|PF07992.10|0.00012,Pyr_redox_2|PF07992.10|17,Pyr_redox_2|PF07992.10|9.2e+02,GDI|PF00996.14|0.037,GDI|PF00996.14|0.031 S_Transcript_47883:206-2104(+)
MQFISSSPIYSPSLNFNNLAVHPFSEQFRPRNSTQLGLPKPIKQKHKWVLFGSLELGFCDSKGLRQCENHRVVSNVNGGDDRRDMRIVGRAGAVMSVDETVGKGKSDGESYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYERDGYTFDVGSSVMFGFSDKGNLNLITQALEAVGHRMQVIPDPTTVHFHLPNNISVRVHKEYEDFIAELTSKFPHEKEGIFKFYGECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGAIARKYIKDPELLSFIDAECFIVSTVNAMQTPMINASMVLCDRHFGGINYPIGGVGGIPKYLAQGLVDHGSKILYKANVTNIIMDQGKAVGVKLSDGRKFYARTIISNATRWDTFGKLLKDEKLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFILETDWNNLEEPYGSIFLTIPTVLDSSLAPEGHHILHIFTTSSIDDWQGLSPEDYRTKKELIADEIISRLEKKMFPGLKSSIMLKEVGTPKTHRRYLARDNGTYGPMPRAVSKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGIFGAGFWGLWGILGVHVFCYGIPTDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST