Transcript Information: S_Transcript_478832.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value3.2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.53377716671407
Replicate 30.14873174260968
Condition 2: 8 Hour
Replicate 10.17197895417043
Replicate 20
Replicate 30.17190199681437
Condition 3: 24 Hour
Replicate 10
Replicate 20.1827726740028
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_478832.p1 GENE.S_Transcript_478832~~S_Transcript_478832.p1 ORF type:3prime_partial len:124 (+),score=-7.31,Asp|PF00026.19|2.3e-20,TAXi_N|PF14543.2|8.1e-06 S_Transcript_478832:148-516(+)
ATGGCAGCGCAGCCGCGAGATGGCCACGTCGGCGTCATTCACCGCATCCCGCTGCAGCGCAGGGCTGGCGACGACCCCCTGCGCCCGTTGCATGAAGCCCACACTACGGCCCTGCGACGACTTCAGAGTGGTTCAATAGGCCTGAAAAATTACATGGACACGCAGTACTTTGGCGAGATCGCCATTGGCACGCCGCCGCAGACGTTTGCGGTGGTTTTTGACACTGGCAGCGCCAACCTCTGGGTGCCTGGCACGGAGTGCGTCGCTGGCAACGTGGCTTGCAGCGCCAAGCACAATGTCTATGACTCATCGCAGTCTTCGACATACCAGGTGCGCGCCTGGGGCTTGGGAAGGCCCCGCTCTCACGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_478832.p1 GENE.S_Transcript_478832~~S_Transcript_478832.p1 ORF type:3prime_partial len:124 (+),score=-7.31,Asp|PF00026.19|2.3e-20,TAXi_N|PF14543.2|8.1e-06 S_Transcript_478832:148-516(+)
MAAQPRDGHVGVIHRIPLQRRAGDDPLRPLHEAHTTALRRLQSGSIGLKNYMDTQYFGEIAIGTPPQTFAVVFDTGSANLWVPGTECVAGNVACSAKHNVYDSSQSSTYQVRAWGLGRPRSHV

Click here to download the sequence:
Link to NCBI Protein BLAST