Transcript Information: S_Transcript_47904.p1


Annotated TAIR IDAT5G38830.1
Annotated Gene NameCysteinyl-tRNA synthetase, class Ia family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15545764-15548094 | Reverse length=511
E-Value3.7E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.225194309614
Replicate 246.554132443189
Replicate 343.388601122053
Condition 2: 8 Hour
Replicate 150.289726419508
Replicate 248.416687354632
Replicate 339.012773321804
Condition 3: 24 Hour
Replicate 141.24444420239
Replicate 236.744127350459
Replicate 343.950353496975


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47904.p1 GENE.S_Transcript_47904~~S_Transcript_47904.p1 ORF type:complete len:536 (+),score=111.04,tRNA-synt_1e|PF01406.15|1.7e-125,tRNA-synt_1e|PF01406.15|4.9e+02,tRNA-synt_1e|PF01406.15|4e+03,tRNA-synt_1g|PF09334.7|0.0016,tRNA-synt_1g|PF09334.7|6e-07,tRNA-synt_1f|PF01921.14|10,tRNA-synt_1f|PF01921.14|4e-05,tRNA-synt_1f|PF01921.14|4.8e+03,tRNA-synt_1|PF00133.18|47,tRNA-synt_1|PF00133.18|0.00015 S_Transcript_47904:202-1809(+)
ATGGCGGAACAGAACTCTACCCGTCCTACCTTCATGCTCTACAATACTATGACAAAAAAGAAAGAGGTTTTCACTCCCAAAGTCCCCAATATAGTCGGCATGTATGTCTGTGGTGTTACGGCTTACGATTTCAGCCATATCGGCCATGCTCGTGCTTATGTCGCTTTTGATGTTCTTTATAGATACTTGAAGGAATTGGGCTATGAAGTGACCTATGTTCGTAATTTCACCGATGTTGATGACAAGATAATTCGCAGAGCCAATGAGCACAAGGAGAAAGATCCAGGTCATCCACTGAGTGATCCTTTGAATTTAAGTAATCATTTTTGCGAAGAGTTTCTCAAAGACATGGATGATCTACAGTGCCTGCTTCCTACCCACCAGCCACGTGTTTCTGATCACATGGATCAAATTAGGGATATGATAGCTAAGATAATTGAAAATGGCTGTGCATACCCTCTTGATGGGGATGTTTACTTTTCCGTTGAGAAGTTCCCAGATTATGGCAAGTTATCCAAACGAAAGCTTGAGGACAACAGAGCTGGTGAACGGGTTTCTGTGGATTCTAGAAAGCGACATCCTGCTGATTTTGCTTTATGGAAGTCTGCAAAACCTGGTGAGCCAAGTTGGGACAGTCCATGGGGTCCAGGAAGACCAGGATGGCACATAGAATGTAGTGCAATGAGTGCTCACTATCTGACATTCTCCTTTGACATTCACGGGGGTGGAATGGATTTAATCTTCCCTCATCATGAGAATGAGCTGGCACAGAGTTGTGCTGCATGTGAAGAGACCCACATTAATTACTGGGTTCATAATGGATTTGTGACTGTTAATGAAGAAAAAATGTCAAAGTCAACGGGGAATTTCTTCACTATTCGTGAGGTTACCAAACAATACCATCCCTTGGCTTTGAGGTATTTCTTGCTAAGCATGCACTACAATTCTCCAGTCAACTATTCACTGTCACAAATAGATATTGCATCAGATGCAGTCTTCCGTATTTATCAGACACTGGAAGATTGTAGAGATGCTCTGTTGCCATTTCAAGAGGGAAACTTGGATGAAAAGACCAATACGAACAGCACAAAACCTAATAAACCTTCAAAAAAGGACGAAGACCCTGTGAAAAAGCTGAAGGAAAATTTTGAGAGTAAAATGGCTGATGACTTGCGTACTCCTGAGATACTGAAGGGTTCTCTGGAAGATTCATTGACACTCATAAACAAGCAATTGACTGAATTAAAGAAGTTGCAAAAGCTAAAGCAGAAACAGCGGAAGCGACAGCAACAACTTTTGTCAATTGTTCAGTTGCTTAATGAATTGGAGAAGGAAATCAGGAAGGTTTTGGATGTCCTTGGGCTGCTTTCGGCTCGCCCTTATTCTGAGGTTCTTCAGCAGTTGAAAGTGAAGGCATTAACTAGAGCTGAGATGACTGAAGATGAAATTAATGTTCTGATTGAAGAAAGAGTAGCAGCTAGGAAGAACAAAGATTTTGCAAAGAGTGATCAAATTCGAAGCGAGTTAACAGCCAAAGGCATCAGCCTTATGGATCAAGCGACAGGTCAAACAACGTGGAGACCTTGTGTGCCAGAGAGAAAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47904.p1 GENE.S_Transcript_47904~~S_Transcript_47904.p1 ORF type:complete len:536 (+),score=111.04,tRNA-synt_1e|PF01406.15|1.7e-125,tRNA-synt_1e|PF01406.15|4.9e+02,tRNA-synt_1e|PF01406.15|4e+03,tRNA-synt_1g|PF09334.7|0.0016,tRNA-synt_1g|PF09334.7|6e-07,tRNA-synt_1f|PF01921.14|10,tRNA-synt_1f|PF01921.14|4e-05,tRNA-synt_1f|PF01921.14|4.8e+03,tRNA-synt_1|PF00133.18|47,tRNA-synt_1|PF00133.18|0.00015 S_Transcript_47904:202-1809(+)
MAEQNSTRPTFMLYNTMTKKKEVFTPKVPNIVGMYVCGVTAYDFSHIGHARAYVAFDVLYRYLKELGYEVTYVRNFTDVDDKIIRRANEHKEKDPGHPLSDPLNLSNHFCEEFLKDMDDLQCLLPTHQPRVSDHMDQIRDMIAKIIENGCAYPLDGDVYFSVEKFPDYGKLSKRKLEDNRAGERVSVDSRKRHPADFALWKSAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFSFDIHGGGMDLIFPHHENELAQSCAACEETHINYWVHNGFVTVNEEKMSKSTGNFFTIREVTKQYHPLALRYFLLSMHYNSPVNYSLSQIDIASDAVFRIYQTLEDCRDALLPFQEGNLDEKTNTNSTKPNKPSKKDEDPVKKLKENFESKMADDLRTPEILKGSLEDSLTLINKQLTELKKLQKLKQKQRKRQQQLLSIVQLLNELEKEIRKVLDVLGLLSARPYSEVLQQLKVKALTRAEMTEDEINVLIEERVAARKNKDFAKSDQIRSELTAKGISLMDQATGQTTWRPCVPERKD*

Click here to download the sequence:
Link to NCBI Protein BLAST