Transcript Information: S_Transcript_479562.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.094893718526945
Replicate 30
Condition 2: 8 Hour
Replicate 10.36688843556358
Replicate 20.14433450735307
Replicate 30.27504319490299
Condition 3: 24 Hour
Replicate 10.56373892878953
Replicate 20.19495751893632
Replicate 30.16272286712978


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_479562.p1 GENE.S_Transcript_479562~~S_Transcript_479562.p1 ORF type:5prime_partial len:465 (+),score=52.58,zf-RVT|PF13966.2|2.2e-17 S_Transcript_479562:1-1395(+)
GGCGAAATTCATGGCGTTAAAGTGTGTCGTGATGCACCACCTGTTTCCCATCTCTTTTTTGCTGATGATAGCATTTTCTTTGCACGGGCAAACATCCAAGAATGCAAACATATCGCTGATTTAATCCGCAGGTACGAAGGTGCATCGGGACAAAAGGTAAATTTTGATAAATCGGAGGTCACCTTCGGGGCAAATGTCCCCCTGGATACAAGGACGGCGATCATCAATGAGCTAGGAGTGAAAGAGGTGAGCAAACATGAAAAATATCTGGGCCTCCCTACTGTAATTGGAAGATCAAAAAAAGCGATCTTTACTGCGGTTAAAGAGCGAATATGGAAAAAACTACAAGGTTGGAAAGAAAAGCTCCTCTCTAAGCCGGGTAAGGAAATTCTCATTAAAGCGGTGGCTCAAGCGATCCCTACCTATATCATGAGCATTTTCAAACTCCCTGATGGGTTATGTGACGAGATTAACTCCCTTTTAGCTCGATTCTGGTGGGGTAGCTCTGAGGAGCGAAGGAAAATTCACTGGAGAAGCTGGGACTATATGTGCCTACCTAAGAAAATGGGTGGCCTGGGCTTCCGAGACATCAAAGTTTTCAATCAAGCCCTCCTAGCAAAACAGGGTTGGCGACTCATGCAAGGTGGAAATTCTTTGCTTCACCGCATCCTTAAGGCCAGGTACTTTAAGCACACAGACTTTGTGGGTTCGTTTAGAGGATTCAATCCTAGTTTTACCTGGCGTAGCTTATGGGGGGCCAAAGCTCTATTGCTGGAAGGAACCAAGTGGAGAGTGGGGAATGGCCTTGACATTCTCGTGTGGAAGGATGCATGGTTACCAGGAGCTTCTTCATCCCTGGTTCCATCCCCCCTCCCTTCTTATGACCCTGCCATGAGGGTGGTGAAGCTCATTGATGCTACAAATAAATGCTGGAATGCCCAGAAGGTGAATGAGACCTTCCAGGAGGACGACAGAAACAAAGTTTTGAATATCAAGATAAGTGCACGACTTCCTCAGGACAAGCGATTTTGGTGGCCAAACAAGAATGGTTGCTACACAGTAAGGTCTGGGTATTGGCTTGGAAAATTGGGATTTAATCTGGGTCAAGAAGGTGTTGTACCAGGGGTTGACAAATTTTGGACCCAGATTTGGCACACAAACGCCCCCCCAAAATTGAGACATTTTCTTTGGAGTGCTTCTGCAAACTGTCTTGCAGTCAAATCAAACCTGGCCAAAAGACAAATTTGCGAATTTGATGTTTGTCAACTGTGCTCAAGCTCTACGGAAACTGACGTGCACGCCCTCTTTGAATGCAATCTGACCCAACTTTTTTGGTCAACAAATGAGTTCATCCCTATGATGTTAGAAGCACCCACTGACTCCTTGAAGGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_479562.p1 GENE.S_Transcript_479562~~S_Transcript_479562.p1 ORF type:5prime_partial len:465 (+),score=52.58,zf-RVT|PF13966.2|2.2e-17 S_Transcript_479562:1-1395(+)
GEIHGVKVCRDAPPVSHLFFADDSIFFARANIQECKHIADLIRRYEGASGQKVNFDKSEVTFGANVPLDTRTAIINELGVKEVSKHEKYLGLPTVIGRSKKAIFTAVKERIWKKLQGWKEKLLSKPGKEILIKAVAQAIPTYIMSIFKLPDGLCDEINSLLARFWWGSSEERRKIHWRSWDYMCLPKKMGGLGFRDIKVFNQALLAKQGWRLMQGGNSLLHRILKARYFKHTDFVGSFRGFNPSFTWRSLWGAKALLLEGTKWRVGNGLDILVWKDAWLPGASSSLVPSPLPSYDPAMRVVKLIDATNKCWNAQKVNETFQEDDRNKVLNIKISARLPQDKRFWWPNKNGCYTVRSGYWLGKLGFNLGQEGVVPGVDKFWTQIWHTNAPPKLRHFLWSASANCLAVKSNLAKRQICEFDVCQLCSSSTETDVHALFECNLTQLFWSTNEFIPMMLEAPTDSLKG*

Click here to download the sequence:
Link to NCBI Protein BLAST