Transcript Information: S_Transcript_479636.p1


Annotated TAIR IDAT5G48130.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19516291-19518450 | Forward length=625
E-Value9E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56423324173528
Replicate 20
Replicate 30.19550603622191
Condition 2: 8 Hour
Replicate 10.15070947220589
Replicate 20
Replicate 30.075321016272019
Condition 3: 24 Hour
Replicate 10
Replicate 20.1601682796915
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_479636.p1 GENE.S_Transcript_479636~~S_Transcript_479636.p1 ORF type:3prime_partial len:283 (+),score=46.94,NPH3|PF03000.10|3.6e-30 S_Transcript_479636:29-847(+)
ATGGAAACTGAACAAAGCCTTTCAACAGGAAACACAATTGTTGCAGAACTGTGGGATATGTATCTCTCTCGGATAGCTTCTAATCCTAGCTTAACGCCTAAGAGATTCATGGATCTTATTGAGAATGTGCCCCTGTCCTACAGAATGAATCATGACAATCTATACAGAGCTATGAATGCCTATCTCCAGGCGCATCCAAGTGTGTCACAGGAAGAGAAAGGTTTGGTTTGCAAGTACCTGAACTGCCAGAAGCTATCACAGGAAGTTTGTGTTGAAGCAGTACAGAACGAGTTTATGCCACTCCGATTAATTGTTCAAGCACTCTTTATTCAACAGCTGAACACTCAACAAGCCTTCAAGGAGTGTTCTGAGTCATTCAGGTTTGCATACTTGGGGGAATTTTCTGGAAGTCTTTCAAGCTCGAGATATCCAAACTCCAAAAGCCAGAATCTAGGAGAGAGTCCCTTCATGGATGGTGGTGGTGAAATAGTAGTCAATAGACCTTTAAGCTGCCTGCTAGAAAAAGATAATCTAGCTTTTCAAGGACCTGATAATATGGCTAAAAAGGAGTATGAATCAACGAGCTTCAGAATTCAGAATCTCGAACAAGAACTCCTGTCTCTGAAGAAAAACCTTCATTTGCAGAAAGTAGGCCAGGAAACAGAACAAGGGCCACCAAAAATAAGACCATATGGGTTGGAAGGAAGGTCCTTCAGCAAGAGAAGGAACGCAATTGGACAAGTCACTGGCTGTATTGGGTCTGTGAACTTTGCTTCCCAGAGGAAATACGCTGGCCGGTTATTGAAGATCTTTCGAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_479636.p1 GENE.S_Transcript_479636~~S_Transcript_479636.p1 ORF type:3prime_partial len:283 (+),score=46.94,NPH3|PF03000.10|3.6e-30 S_Transcript_479636:29-847(+)
METEQSLSTGNTIVAELWDMYLSRIASNPSLTPKRFMDLIENVPLSYRMNHDNLYRAMNAYLQAHPSVSQEEKGLVCKYLNCQKLSQEVCVEAVQNEFMPLRLIVQALFIQQLNTQQAFKECSESFRFAYLGEFSGSLSSSRYPNSKSQNLGESPFMDGGGEIVVNRPLSCLLEKDNLAFQGPDNMAKKEYESTSFRIQNLEQELLSLKKNLHLQKVGQETEQGPPKIRPYGLEGRSFSKRRNAIGQVTGCIGSVNFASQRKYAGRLLKIFRR

Click here to download the sequence:
Link to NCBI Protein BLAST