Transcript Information: S_Transcript_479672.p1


Annotated TAIR IDAT4G26170.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: effector of transcription2 (TAIR:AT5G56780.1); Has 75 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13256930-13259382 | Forward length=506
E-Value2.6E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.21420184036422
Replicate 30.17905569013204
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.22003700559561
Replicate 30.9794968701016


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_479672.p1 GENE.S_Transcript_479672~~S_Transcript_479672.p1 ORF type:internal len:103 (+),score=14.50 S_Transcript_479672:3-308(+)
ATTGTCACCGAGGAATTCAACCAAAGTCACGCCTGTGGCGTGACTTTGGGCAATGGATCGACTTGTAACAAGCCGCCAGTTGAGGGGAGAAAACGGTGTGTTGAGCATAAAGGAATGAGGTTAACTAAAAACTCGATTGTGGCTCGTATTCAAGCTTTTCCTCACGAAAAACTTACATCTACAGCAGACACTATAAACATTGTTGAGGAGTATTTCTCCCCTATTTGTGGAGTTATTCAGCATGATGGCTCACCTTGTGCACATCCACCATTTCCAGGGAGGAAGAGATGTGAGAAGCACAAAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_479672.p1 GENE.S_Transcript_479672~~S_Transcript_479672.p1 ORF type:internal len:103 (+),score=14.50 S_Transcript_479672:3-308(+)
IVTEEFNQSHACGVTLGNGSTCNKPPVEGRKRCVEHKGMRLTKNSIVARIQAFPHEKLTSTADTINIVEEYFSPICGVIQHDGSPCAHPPFPGRKRCEKHKG

Click here to download the sequence:
Link to NCBI Protein BLAST