Transcript Information: S_Transcript_4798.p1


Annotated TAIR IDAT5G40490.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16225483-16227423 | Forward length=423
E-Value1.6E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 198.376819869361
Replicate 296.109935513079
Replicate 395.32802107592
Condition 2: 8 Hour
Replicate 1108.87765241069
Replicate 2118.52947775349
Replicate 3103.93584795252
Condition 3: 24 Hour
Replicate 191.356570798395
Replicate 291.073839131338
Replicate 384.517140882579


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4798.p1 GENE.S_Transcript_4798~~S_Transcript_4798.p1 ORF type:complete len:379 (+),score=99.45,RRM_1|PF00076.18|4.8e-13,RRM_1|PF00076.18|3.1e-18,RRM_6|PF14259.2|1.3e-11,RRM_6|PF14259.2|1.3e-13,RRM_7|PF16367.1|0.05,RRM_7|PF16367.1|3.5e-09,RRM_5|PF13893.2|0.039,RRM_5|PF13893.2|1e-05 S_Transcript_4798:316-1452(+)
ATGGAGTCGAGAGAACCCGAATCCAACTACGAGGGTGGCCCAAACGACGACGTTCACGACAACAATAATCCTTCTGTTCACAATGAAGATGACGATCGCTCTCAACCTCCTACTGGCGATGGTGCTAGTCCTGGAAAGATTTTCATAGGAGGTTTAGCTAGAGAGACAACTTCTGTGCAATTTGTCAAGCATTTCGGGAAGTATGGAGAGATCACAGATTCCGTGATAATGAAGGATAGGAGGACTGGTCAGCCTCGTGGGTTCGGATTTATAACTTATGCTGATCCCTCGGTGGTGGATAGAGTCATTCAGGGTGATCATGTCATAAATGGAAAACAAGTGGAAATTAAGAGGACGATTCCAAAGGGTGCAATTGGCTCCAAGGATTTCAAAACCAAAAAGATATTTGTTGGTGGAATCCCTACGTCTGTTAATGAAGATGAATTCAAAGACTTCTTTTCCAAATTTGGTGAGGTGAAAGAGCACCAAATCATGCGGGACCACTCTTCTAACCGTTCTCGTGGCTTTGGATTTATTACATTTGATTCAGAGGAGTCTGTTGACGATCTTTTGTCAAGGGGAAATAGGATTGAGTTTGCTGGAACGAAGGTGGAGATAAAGAAGGCAGAACCAAAGAAACCAAATCCCCCTCCTTCCACTTCCAAACGTTATAACGATTCCAGGTCTTCATATGGTGGTGGGTTTGGAGATGCATATGGTGGGTATGGAGGTGGTGGATTTGGTGCCGGTTCTTATAGAGCAGGTGGTGCCTATGGGAGCAGAGCGGGTGCATATGGTGGGTATGGTGGAAGTGAGTTTGGTGGGTATGGTGGATATGGTGCTGGTGCATTGGGAGCTTACAGAGGAGACATGTCTTATGGAGGATATTCTGGCCGTTATGGTGCTGGCTTCAGTAGAGGTTATGATATGGGAAGTGGATATGGGGAGCCTGGAGACGGTTATGGAGGATATGGAGGGGGTGGAGGCGGCAGTGGTTATGGTGGTGGTTATGATTCTTCCCTTGGTGGTGGTTATGGAGGCAATAGCGGAGGTTCTATGTACGGTGGTAGCAGCAGTGGAAGAGGTGGATTTGGTGGTGCAGCCGCAAATGGACGCTATCATCCTTATGCCCGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4798.p1 GENE.S_Transcript_4798~~S_Transcript_4798.p1 ORF type:complete len:379 (+),score=99.45,RRM_1|PF00076.18|4.8e-13,RRM_1|PF00076.18|3.1e-18,RRM_6|PF14259.2|1.3e-11,RRM_6|PF14259.2|1.3e-13,RRM_7|PF16367.1|0.05,RRM_7|PF16367.1|3.5e-09,RRM_5|PF13893.2|0.039,RRM_5|PF13893.2|1e-05 S_Transcript_4798:316-1452(+)
MESREPESNYEGGPNDDVHDNNNPSVHNEDDDRSQPPTGDGASPGKIFIGGLARETTSVQFVKHFGKYGEITDSVIMKDRRTGQPRGFGFITYADPSVVDRVIQGDHVINGKQVEIKRTIPKGAIGSKDFKTKKIFVGGIPTSVNEDEFKDFFSKFGEVKEHQIMRDHSSNRSRGFGFITFDSEESVDDLLSRGNRIEFAGTKVEIKKAEPKKPNPPPSTSKRYNDSRSSYGGGFGDAYGGYGGGGFGAGSYRAGGAYGSRAGAYGGYGGSEFGGYGGYGAGALGAYRGDMSYGGYSGRYGAGFSRGYDMGSGYGEPGDGYGGYGGGGGGSGYGGGYDSSLGGGYGGNSGGSMYGGSSSGRGGFGGAAANGRYHPYAR*

Click here to download the sequence:
Link to NCBI Protein BLAST