Transcript Information: S_Transcript_480019.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.25956223008841
Replicate 30
Condition 2: 8 Hour
Replicate 10.50177388981489
Replicate 20.5263964385818
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.26663307736879
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_480019.p2 GENE.S_Transcript_480019~~S_Transcript_480019.p2 ORF type:3prime_partial len:85 (+),score=12.17,RVT_1|PF00078.23|3.7e-13 S_Transcript_480019:1334-1585(+)
ATGACATGTATTACCACTAGTAGATTTTCTGTAAATATAAATGGGAGTCCTAGAGGTTACTTTGAAGGGAAGTGTGGACTTAGACAAGGGGATCCCATCTCCTCCTACATTTTTGTGCTTTGCATGGAGGGGTTCTCTAGGATGATGAGGAGAGCTAGTACTGTAAAAGAGTTCTCCTTCCACCCTAAGACTGTGAGGGTGAAGGTTAACCATATCATTTTTGCTGATGACCTCCTTTTATTTTCTAGAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_480019.p2 GENE.S_Transcript_480019~~S_Transcript_480019.p2 ORF type:3prime_partial len:85 (+),score=12.17,RVT_1|PF00078.23|3.7e-13 S_Transcript_480019:1334-1585(+)
MTCITTSRFSVNINGSPRGYFEGKCGLRQGDPISSYIFVLCMEGFSRMMRRASTVKEFSFHPKTVRVKVNHIIFADDLLLFSRG

Click here to download the sequence:
Link to NCBI Protein BLAST