Transcript Information: S_Transcript_480029.p1


Annotated TAIR IDAT4G15093.1
Annotated Gene Namecatalytic LigB subunit of aromatic ring-opening dioxygenase family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:8618454-8619472 | Forward length=269
E-Value4E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17169678216245
Replicate 20.14234057779042
Replicate 30.11898539408775
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.27504319490299
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.16272286712978


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_480029.p1 GENE.S_Transcript_480029~~S_Transcript_480029.p1 ORF type:internal len:155 (+),score=-1.95,LigB|PF02900.14|2.7e-20 S_Transcript_480029:1-462(+)
CTCAGAGCGATCAAAGCGATGCGCATGCCAGTTGCGTTCGTTTGCCATGGTGGCGGCCCGATGCCGGTGACTCGGCCACACACGCACGGCTCGCTGCCGCAGCACCTGAAGGCGCTGGGGCAGAAGATTCTGGCGGCCAAGCCGAAAGCGCTCGTTGTCATGTCTGCCCATTGGGAGGAGAGCGCACCAACAGTCATTGCTGACGCAAAACCCAGCCTGCTATACGATTACTATGGCTTTGAGCCTGAAGCATACAAGCTCAGATACGACGCGCCTGGCGACCCAGCGACTGCAGAGCGCGTGCTTGCCCAGCTCAAGCAACACGGCTTTGCTGCGCAGCGAGCCCAGGGAACGAGGCGTGGCTGGGACCATGGCGTCTTTATCCCCCTCTCACTCATGCTGCCGCAAGCCAGCATCCCCATCGTCCAAGTGTCCCTGCTGTCGTCCCCTGATCCAATGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_480029.p1 GENE.S_Transcript_480029~~S_Transcript_480029.p1 ORF type:internal len:155 (+),score=-1.95,LigB|PF02900.14|2.7e-20 S_Transcript_480029:1-462(+)
LRAIKAMRMPVAFVCHGGGPMPVTRPHTHGSLPQHLKALGQKILAAKPKALVVMSAHWEESAPTVIADAKPSLLYDYYGFEPEAYKLRYDAPGDPATAERVLAQLKQHGFAAQRAQGTRRGWDHGVFIPLSLMLPQASIPIVQVSLLSSPDPMQ

Click here to download the sequence:
Link to NCBI Protein BLAST