Transcript Information: S_Transcript_48004.p1


Annotated TAIR IDAT4G25420.1
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)GA5, GA20OX1, AT2301, ATGA20OX1
Annotation TypeOrtholog
Chromosome Positionchr4:12990982-12992409 | Reverse length=377
E-Value2.7E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3925003431057
Replicate 25.2371268141576
Replicate 32.8409265179284
Condition 2: 8 Hour
Replicate 18.1316513583007
Replicate 23.6156523054104
Replicate 38.4509799848032
Condition 3: 24 Hour
Replicate 12.2617177351373
Replicate 21.7741872698656
Replicate 33.757829848237


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48004.p1 GENE.S_Transcript_48004~~S_Transcript_48004.p1 ORF type:complete len:396 (+),score=62.55,2OG-FeII_Oxy|PF03171.16|4.8e-30,DIOX_N|PF14226.2|6.5e-25 S_Transcript_48004:2290-3477(+)
ATGGCTATTGAGTGCATGAGAAACATATCTCCTATGCCTTCAATAACCTACAAACAAGTACCCAAAGATGACCAAAGTAACAACAACAATAATAATCATACTCAACCTCTTGTTTTTGATCCCTCATTTCTTAGCAACCAATCCAATATACCCAAACAATTCATATGGCCCGACGATGAGAAGCCATGCTCCAATTCTAACCTTGAGGAACTCCAAGTCCCCCTTATCGACCTGCAGGGTTTCCTGTCAGGAAACCCTGTGGCGACCTTGGAGGCCTCGAGGCTCATCCGTGAAGCCTGTCTTAAGCATGGCTTCTTCCTAGTCACCAACCATGGTGTTGATGCTAAGTTGATCAAAGATGCCCATGATGTTATGGATGACTTCTTTGACCAACCTCTGGCTCAGAAGCAGAAAGCTCAAAGGAAACTTGGAGAGCATTGTGGCTATGCTAGTAGCTTTACTGGTAGGTTCTCCTCCAAGCTCCCTTGGAAAGAGACTCTCTCCTTCCAATACTCTCCTGACCACGACTCGATTGTTCAAGATTACTTTAACACCAGAGTTGGTGACGACTTGGAACACTTGGGGAAGGTTTACCAAGAGTATTGTGATGCGATGAGCAAACTTTCATTAGGAATCATGGAGCTACTTGGCTTAAGTCTTGGAGTAGGGAAAAAGTGTTTCAGAGAATTCTTTCAAGGGCATGATTCGGTGATGCGACTCAACTATTATCCACCATGTAAAAGGCCTGATCTTACCCTAGGAACTGGCCCTCATTGTGATCCTACTTCATTAACCATCCTTCACCAAGATCAAGTGGGTGGCCTTCAAGTTTATGCCGATGGAAAGTGGCGTTCCATTTCCCCCAATTTTAATGCTTTTGTCATTAACATTGGCGACACTTTTATGGCTCTAGCAAATGGAAGGTACAAGAGTTGCTTGCATAGAGCAGTGGTGAATAGCGAGAAGTCAAGGAAATCACTAGCATTTTTTCTATGTCCAGGCAAGGATAAAGTGGTGAAGCCACCAAGTGAACTTGTGGATAGTGAAAATCCAAGGAAGTATCCAGATTTTGTGTGGCCAATGCTACTAGAATTTACACAAAAGCACTATAGAGCTGATATGAATACGTTAAACGCCTTCTCAGAATGGGTTACCATCAAAGAGCCTAATTTATTAAAAACTAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48004.p1 GENE.S_Transcript_48004~~S_Transcript_48004.p1 ORF type:complete len:396 (+),score=62.55,2OG-FeII_Oxy|PF03171.16|4.8e-30,DIOX_N|PF14226.2|6.5e-25 S_Transcript_48004:2290-3477(+)
MAIECMRNISPMPSITYKQVPKDDQSNNNNNNHTQPLVFDPSFLSNQSNIPKQFIWPDDEKPCSNSNLEELQVPLIDLQGFLSGNPVATLEASRLIREACLKHGFFLVTNHGVDAKLIKDAHDVMDDFFDQPLAQKQKAQRKLGEHCGYASSFTGRFSSKLPWKETLSFQYSPDHDSIVQDYFNTRVGDDLEHLGKVYQEYCDAMSKLSLGIMELLGLSLGVGKKCFREFFQGHDSVMRLNYYPPCKRPDLTLGTGPHCDPTSLTILHQDQVGGLQVYADGKWRSISPNFNAFVINIGDTFMALANGRYKSCLHRAVVNSEKSRKSLAFFLCPGKDKVVKPPSELVDSENPRKYPDFVWPMLLEFTQKHYRADMNTLNAFSEWVTIKEPNLLKTK*

Click here to download the sequence:
Link to NCBI Protein BLAST