Transcript Information: S_Transcript_480324.p1


Annotated TAIR IDAT3G14040.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4648607-4650226 | Reverse length=445
E-Value4.3E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49283335620705
Replicate 20.61285526548652
Replicate 30.17076607484815
Condition 2: 8 Hour
Replicate 10.098728658875616
Replicate 20.41429349332827
Replicate 30.39473791861077
Condition 3: 24 Hour
Replicate 10
Replicate 20.1049250535942
Replicate 30.23353744819552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_480324.p1 GENE.S_Transcript_480324~~S_Transcript_480324.p1 ORF type:5prime_partial len:216 (+),score=38.20,Glyco_hydro_28|PF00295.13|3.5e-64 S_Transcript_480324:3-650(+)
GCCCCAAAAGATAGTCCTAACACGGATGGCATCCACATTGGGCGCTCAGATGGTGTCAACATAACCCAAACTAACATTGGAACCGGAGATGATTGTGTGTCTGTAGGTGATGGCACGAAGAACCTCTTGGTCGAGGGGGTCAACTGTGGGCCTGGACATGGTATCAGTGTGGGAAGTCTGGGTAGGTACCCCAAGGAGGAACCAGTGACTGGTGTGACCGTGAGGAACTGTGTCATCAAGGATACAGATAATGGTGTTCGGGTAAAAACATGGTTGAATTCTTATGAAAGCTCTTGCAGTGGCCTACTTTTTGAGAACATCACTGTCGAGAATGTTTGGTACCCGATCTTAGTTGATCAGGAGTATTGCCCCTACAACCACTGCAAAGCCAAGACCCCCTCAAAGGTAAAGATCAGCGACGTTAAATTCAGGAACATCAGGGGGACATCAGCTAGGAAGGAAGCAGTGAAGCTGGTCTGCAGCAGCACACTGCATTGTGAGCAGGTGGAGCTTACTGACATCGAATTGAAATCAATTGGAAGTGATGGTCCTGCTGTCTCCATGTGTAAATTTGTCAAGCCAGTTACCAGCGGAAAACAGATTCCTCCTGCTTGCAATGCGCCTGCAACGCCAAGTGCAGAACTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_480324.p1 GENE.S_Transcript_480324~~S_Transcript_480324.p1 ORF type:5prime_partial len:216 (+),score=38.20,Glyco_hydro_28|PF00295.13|3.5e-64 S_Transcript_480324:3-650(+)
APKDSPNTDGIHIGRSDGVNITQTNIGTGDDCVSVGDGTKNLLVEGVNCGPGHGISVGSLGRYPKEEPVTGVTVRNCVIKDTDNGVRVKTWLNSYESSCSGLLFENITVENVWYPILVDQEYCPYNHCKAKTPSKVKISDVKFRNIRGTSARKEAVKLVCSSTLHCEQVELTDIELKSIGSDGPAVSMCKFVKPVTSGKQIPPACNAPATPSAEL*

Click here to download the sequence:
Link to NCBI Protein BLAST