Transcript Information: S_Transcript_480475.p1


Annotated TAIR IDAT3G20890.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7319939-7321054 | Forward length=292
E-Value1.3E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.017106888395
Replicate 235.532703182103
Replicate 337.419340843305
Condition 2: 8 Hour
Replicate 134.62569954124
Replicate 236.030450967139
Replicate 332.36643175809
Condition 3: 24 Hour
Replicate 135.756625081973
Replicate 237.514572319796
Replicate 331.461181705329


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_480475.p1 GENE.S_Transcript_480475~~S_Transcript_480475.p1 ORF type:complete len:380 (+),score=87.58,RRM_6|PF14259.2|0.0002,RRM_6|PF14259.2|1.8e-10,RRM_6|PF14259.2|6.8e-14,RRM_1|PF00076.18|0.0047,RRM_1|PF00076.18|8.8e-08,RRM_1|PF00076.18|1.2e-09 S_Transcript_480475:103-1242(+)
ATGTTCTACAACAGGGGATACTCGGATTATGCTGATGGGCGTGAAATGGCTCCTAAGAGACAGCGGTTGATGGATTCAGGATCTTCATATTATGGGGGTTCAACGGGATATGGGGCATCACCAGGTTATGGTGCTTCACCTGGCTATGGGGCTTCACCTGGCTCAAGTTACATGTATAATCCTTCCCCTTATGCGGGCTATACTGGCCAGCCTCCCCCCTTCCCTGTTGTCCGACTTCGTGGTCTCCCATTTGACTGTACTGAGGCTGATATATCTGATTTTCTACGTGGTCTGGACATAGTGGATGTTCTTTTTGTGCACAAAGGCGGCAGGTTTTCTGGGGAAGCCTATTGTGTTTTGGGCTATCCTATGCAGGTTGATTTTGCTCTTCAGAGGAATAGGCAGAATATTGGCCGGAGATATGTAGAGGTGTTCCGGAGCAAGAGGCATGAATATTATAAGGCTATTGCGAGTGAAGTTTCAGATTCTCATGGTGGCTCTCCACATCGAGTTTCTAGAGCAAAGTCTTATGATGAAGGGAAGGACCTGTTAGAACACACTGGGATATTGAGATTGAGAGGCTTGCCTTATTCTGCTAGGAAGGAAGATATCAAAAACTTCTTTAAAGATTTCGTGCTTGCTGATGATGTCATTCATATCACCTATAATTCTGCGGGTAGACCATCTGGGGAAGCTTTTGTTGAGTTTTCTGGCCCAGATGATTCCAAGGCAGCGATGTCTAAGGACAAAATGACTCTTGGGAGTCGCTACATTGAGTTGTTTCCTGCATCACGAGAAGATATGGACGAAGCAATCGCTAGAGGAAGGCCAAACTCTGATGACGAACTAAATGAGCCAGTGAAGCATACTGGAGTATTGAGATTGAGGGGGTTGCCTTTTTCAGCCACAAAAGAAGATATAATAGATTTCTTCAGTGGATTTGTGTTGTCAGAAGATTCAATCCATATTACATTCAATTCAGATGGGCGACCTACTGGTGAAGCATTTGTCGAGTTTGCAGGTGCTGAAGATTCTGAAGCCGCAATGGAAAAGGATAGGAAGACCCTTGGGAGTCGTTACATAGAGCTCTTCCCCTCGTCAGAGCAAGACCTAAATGAGGCACTTTCAAAAGGACGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_480475.p1 GENE.S_Transcript_480475~~S_Transcript_480475.p1 ORF type:complete len:380 (+),score=87.58,RRM_6|PF14259.2|0.0002,RRM_6|PF14259.2|1.8e-10,RRM_6|PF14259.2|6.8e-14,RRM_1|PF00076.18|0.0047,RRM_1|PF00076.18|8.8e-08,RRM_1|PF00076.18|1.2e-09 S_Transcript_480475:103-1242(+)
MFYNRGYSDYADGREMAPKRQRLMDSGSSYYGGSTGYGASPGYGASPGYGASPGSSYMYNPSPYAGYTGQPPPFPVVRLRGLPFDCTEADISDFLRGLDIVDVLFVHKGGRFSGEAYCVLGYPMQVDFALQRNRQNIGRRYVEVFRSKRHEYYKAIASEVSDSHGGSPHRVSRAKSYDEGKDLLEHTGILRLRGLPYSARKEDIKNFFKDFVLADDVIHITYNSAGRPSGEAFVEFSGPDDSKAAMSKDKMTLGSRYIELFPASREDMDEAIARGRPNSDDELNEPVKHTGVLRLRGLPFSATKEDIIDFFSGFVLSEDSIHITFNSDGRPTGEAFVEFAGAEDSEAAMEKDRKTLGSRYIELFPSSEQDLNEALSKGR*

Click here to download the sequence:
Link to NCBI Protein BLAST