Transcript Information: S_Transcript_480583.p1


Annotated TAIR IDAT5G03340.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:810091-813133 | Reverse length=810
E-Value2.4E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3024204685816
Replicate 20.50142703539806
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.25754331336758
Replicate 30.28661414096723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_480583.p1 GENE.S_Transcript_480583~~S_Transcript_480583.p1 ORF type:internal len:88 (+),score=12.26,CDC48_N|PF02359.14|5.5e-07 S_Transcript_480583:1-261(+)
AGCTGGTCTAGAACGTTTTGTGCCTGTCAGACTCAGCACATCATGAAGGAGGAGGACGTGCCAGCGGGATCGCAGCCGGCAGAGCCTGCCAAGGAGAAGAAGGACTTCAGCACCGCGATCCTGGACCGCAAGAAGTCGCCAAATAGGCTCGTCGTTGATGATGCCATCAACGACGACAACAGCGTCGTTGCGCTGCATCCCACCACCATGGATACACTGCAGCTGTTTCGCGGAGACACTGTGCTTTTGAAGGGCAAGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_480583.p1 GENE.S_Transcript_480583~~S_Transcript_480583.p1 ORF type:internal len:88 (+),score=12.26,CDC48_N|PF02359.14|5.5e-07 S_Transcript_480583:1-261(+)
SWSRTFCACQTQHIMKEEDVPAGSQPAEPAKEKKDFSTAILDRKKSPNRLVVDDAINDDNSVVALHPTTMDTLQLFRGDTVLLKGKK

Click here to download the sequence:
Link to NCBI Protein BLAST