Transcript Information: S_Transcript_48068.p1


Annotated TAIR IDAT3G08020.1
Annotated Gene NamePHD finger family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2557753-2561534 | Reverse length=779
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.413783092027
Replicate 210.681397529608
Replicate 312.938088650892
Condition 2: 8 Hour
Replicate 114.008100102559
Replicate 215.668180715954
Replicate 315.705095708958
Condition 3: 24 Hour
Replicate 19.3694271140621
Replicate 211.291957824173
Replicate 310.699363137775


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48068.p1 GENE.S_Transcript_48068~~S_Transcript_48068.p1 ORF type:complete len:851 (+),score=179.48,PHD|PF00628.25|0.00022,PHD|PF00628.25|0.00039,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|1e-06 S_Transcript_48068:156-2708(+)
ATGGCATTTCATGTCGCTTGCCCAATTACCTGCAAGCGAATCTGCTACTGTTCGTTAGGGTTTGGGCCCGCACTCCAGACCTCAAGAGGAAAGTCCGATTTTCTCAATGGAATCGATTTAATCGACAAATTTTTGACCGATCCATGGTTAATTAGGGTTAAGGAAGGTACTACGGTTCAAGTCGCTGTCCCTAAACTCGCCCCGCCGCCTCCTCCGCCTCCTCCTGTCTCTGCCGCCGATGAGGAAGCCGCTGCCGCCGTCGCCGCTGCTGAGGAGCTCTTGTCGGCTCAGACTAAGCGCGCCGCCTTGCAGAAGAAGGCTGCTGTTGCTTCTATGGCTGCTGAGGACTTTGCCAGGCGCTTTGAGTCCGGCGCTCTGGTGGATGTCCCCAAAGATTCTACAGGAGAGGACCAGGGTCAGGGCAATGTAAATGTGATGTGTCGATTATGCTTCTCTGGTGAGAATGAAGGAAGTGAAAGGGCAAGAAGGATGCTTCCATGCAGAAGTTGTGGAAAGAAATATCACAGGAGTTGCTTGAAAACATGGTCTCAACACAGAGATTTGTTTCATTGGAGTTCATGGACATGCCCCTCCTGTCGTGTATGCGAGGTTTGTCGTAGGGCTGGAGAACCAAATAAGTTTAAATTCTGCAAGAGATGTGATGGAGCAATTCATTGCTACTGTATGCAACCTCCACACAAGAATGTTAGTTCTGGACCTTTTTTGTGCTCCAAGCATACAAAATGCCACAGCTGTGGGTCAAATGTTCCAGGCAATGGGATGAGTTTAAGGTGGTTTTTAGGGTATACATGTTGTGATGCTTGTGGGAGGTTGTTCACTAAAGGCAACTACTGTCCTGTTTGCTTGAAGGTCTATCGAGATTCAGAGTCAACACCTATGGTTTGCTGTGATATTTGCCAACGTTGGGTGCACTGCCAGTGTGACGGGATCAGTGACGAAAGATATTTGCAGTTTCAAATTGATGGAAATCTTCCATACACATGCCCGACATGCCGAGGCGAGTGCTACCAGGTTAGGGATCTTGAAGATGCTGTACAAGAGCTGTGGAGGAGAAGAGATGAAGCTGATCGAGACTTGATAGCAGGTTTGAGGGCAGCTGCTGGTTTGCCAACTGACGATGAATATTTTTCAATTTCTCCGTTCTCTGATGATGAAGACAATGGTCCAAGTGCAATTAGGAGTGAGCTTGGGCGTGCAAAATACGCGTTCAAAAGTTTAGCAGACTTTTCCCCAAAAAAGACTAAGGAATCAAATAAAAAATCTTCGAGCAAAAAACAAGTGAAGAAAAAGGGTTTCCAGTTGCCTGTGAATGATGCAATCGAGGTTAATTCTGATGAGCAGCATGATGTAGATGACTTGCTCTCGCAAGCACCAGATTCCTTTTCTACTCCTGTCACTGGAAGCTTGAGCCCGGCTGTCAGAATATGCTCCATGAATGAACAAGGGGCTTTGAAGGACAAACTTGTTGATGAGGCCACAGGGAACAGTGAGGACAGAAAACCAACAATTTTACAGCTTAAAAGCAAGAAGGTCAATGACAATGGCACAAGCGAGGATGTGGGCAAAGGTGCTAGCAAACCAAAGATTATGAAGGGAACCAAGTTAGTCATACACTTGGGTGGACGGAATAAAACCATGACCAATTCTCCAAGGTCCGATTCTTCAAGCTATCAGAGGGAACAAGAGTTGTTGACACAAAGTGGTAGTGAAGCAGTGAGTCAACAAAGAATGGTTGATTACATAGCAGACAAATCTGATGGCACAGCTACCTCTGATGATGGTAACAAAGTAGACAGCCCCCAGGAAATAAAAGGGCTGAATCCAAGGGAGCGTAACATAATAAAGCTTGGTAAGAATAAACCACAAGCGTCTGGCATAAAATTTAAAACTGACAGCAGGAATGGCTTGTTTAGTCCTGAGAGCACTCGAAATATTTCACTAAAGAGAAGCTACGAAGCTAGTGCAGGTACAGTAGGGCTTCAAAACAATGTATCGAAGAGTGAGAAGGTGTCTTTGAGAAAGCATCCAGAGAACAGGTCCGACATATCTATTGATGGTAACAAAAGTAAAAAGCAAGAGCCTCTGCAATCAGATCCTTTGACAAAGGATTCCAGGCCCTTGCTAAGACTCAAATTCAAGACCCCTTATCCAGGATCCTGGCCTGTGCAAGGTGAGGAAGAAAGGGGATCCATCAAAGGTCAACGGTCCAAGAGAAAGAGACCTTCCCCCTTGGTAGAAAAGCCTACACAACAGGAAAGGGAAGATGTGAAGGAGTCGCAAGATGACAGTTTAATGAATGAGATTATGGATGCCAATTGGGTTTTGAAAAAGTTGGGCAGAGATGCTATAGGGAAGAGAGTAGAAGTTCATCAGTCGTCTGATAATTCTTGGCATAAAGGAGTTGTTGGTGATGTCATTGAGGGGACATCGCGATTGTCTATTGATCTCGATGACGGAAGAACCAAGATGTTGGAACTTGGAAAGCAAGGCATTCGATTTGTTCCACAGAAGGATAAGAGACTAAAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48068.p1 GENE.S_Transcript_48068~~S_Transcript_48068.p1 ORF type:complete len:851 (+),score=179.48,PHD|PF00628.25|0.00022,PHD|PF00628.25|0.00039,PHD|PF00628.25|1.6e+04,PHD|PF00628.25|1e-06 S_Transcript_48068:156-2708(+)
MAFHVACPITCKRICYCSLGFGPALQTSRGKSDFLNGIDLIDKFLTDPWLIRVKEGTTVQVAVPKLAPPPPPPPPVSAADEEAAAAVAAAEELLSAQTKRAALQKKAAVASMAAEDFARRFESGALVDVPKDSTGEDQGQGNVNVMCRLCFSGENEGSERARRMLPCRSCGKKYHRSCLKTWSQHRDLFHWSSWTCPSCRVCEVCRRAGEPNKFKFCKRCDGAIHCYCMQPPHKNVSSGPFLCSKHTKCHSCGSNVPGNGMSLRWFLGYTCCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCQCDGISDERYLQFQIDGNLPYTCPTCRGECYQVRDLEDAVQELWRRRDEADRDLIAGLRAAAGLPTDDEYFSISPFSDDEDNGPSAIRSELGRAKYAFKSLADFSPKKTKESNKKSSSKKQVKKKGFQLPVNDAIEVNSDEQHDVDDLLSQAPDSFSTPVTGSLSPAVRICSMNEQGALKDKLVDEATGNSEDRKPTILQLKSKKVNDNGTSEDVGKGASKPKIMKGTKLVIHLGGRNKTMTNSPRSDSSSYQREQELLTQSGSEAVSQQRMVDYIADKSDGTATSDDGNKVDSPQEIKGLNPRERNIIKLGKNKPQASGIKFKTDSRNGLFSPESTRNISLKRSYEASAGTVGLQNNVSKSEKVSLRKHPENRSDISIDGNKSKKQEPLQSDPLTKDSRPLLRLKFKTPYPGSWPVQGEEERGSIKGQRSKRKRPSPLVEKPTQQEREDVKESQDDSLMNEIMDANWVLKKLGRDAIGKRVEVHQSSDNSWHKGVVGDVIEGTSRLSIDLDDGRTKMLELGKQGIRFVPQKDKRLKS*

Click here to download the sequence:
Link to NCBI Protein BLAST