Transcript Information: S_Transcript_48071.p1


Annotated TAIR IDAT3G08020.1
Annotated Gene NamePHD finger family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2557753-2561534 | Reverse length=779
E-Value3E-275
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8178709132654
Replicate 26.7112180057958
Replicate 36.3595641667588
Condition 2: 8 Hour
Replicate 17.406108459891
Replicate 26.3919567542076
Replicate 36.2739994797913
Condition 3: 24 Hour
Replicate 18.6088210800371
Replicate 25.8613305800898
Replicate 34.5971213940359


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48071.p1 GENE.S_Transcript_48071~~S_Transcript_48071.p1 ORF type:complete len:812 (+),score=177.54,PHD|PF00628.25|0.00017,PHD|PF00628.25|0.00034,PHD|PF00628.25|1.3e+04,PHD|PF00628.25|9.5e-07 S_Transcript_48071:156-2591(+)
ATGGCATTTCATGTCGCTTGCCCAATTACCTGCAAGCGAATCTGCTACTGTTCGTTAGGGTTTGGGCCCGCACTCCAGACCTCAAGAGGAAAGTCCGATTTTCTCAATGGAATCGATTTAATCGACAAATTTTTGACCGATCCATGGTTAATTAGGGTTAAGGAAGGTACTACGGTTCAAGTCGCTGTCCCTAAACTCGCCCCGCCGCCTCCTCCGCCTCCTCCTGTCTCTGCCGCCGATGAGGAAGCCGCTGCCGCCGTCGCCGCTGCTGAGGAGCTCTTGTCGGCTCAGACTAAGCGCGCCGCCTTGCAGAAGAAGGCTGCTGTTGCTTCTATGGCTGCTGAGGACTTTGCCAGGCGCTTTGAGTCCGGCGCTCTGGTGGATGTCCCCAAAGATTCTACAGGAGAGGACCAGGGTCAGGGCAATGTAAATGTGATGTGTCGATTATGCTTCTCTGGTGAGAATGAAGGAAGTGAAAGGGCAAGAAGGATGCTTCCATGCAGAAGTTGTGGAAAGAAATATCACAGGAGTTGCTTGAAAACATGGTCTCAACACAGAGATTTGTTTCATTGGAGTTCATGGACATGCCCCTCCTGTCGTGTATGCGAGGTTTGTCGTAGGGCTGGAGAACCAAATAAGTTTAAATTCTGCAAGAGATGTGATGGAGCAATTCATTGCTACTGTATGCAACCTCCACACAAGAATGTTAGTTCTGGACCTTTTTTGTGCTCCAAGCATACAAAATGCCACAGCTGTGGGTCAAATGTTCCAGGCAATGGGATGAGTTTAAGGTGGTTTTTAGGGTATACATGTTGTGATGCTTGTGGGAGGTTGTTCACTAAAGGCAACTACTGTCCTGTTTGCTTGAAGGTCTATCGAGATTCAGAGTCAACACCTATGGTTTGCTGTGATATTTGCCAACGTTGGGTGCACTGCCAGTGTGACGGGATCAGTGACGAAAGATATTTGCAGTTTCAAATTGATGGAAATCTTCCATACACATGCCCGACATGCCGAGGCGAGTGCTACCAGGTTAGGGATCTTGAAGATGCTGTACAAGAGCTGTGGAGGAGAAGAGATGAAGCTGATCGAGACTTGATAGCAGGTTTGAGGGCAGCTGCTGGTTTGCCAACTGACGATGAATATTTTTCAATTTCTCCGTTCTCTGATGATGAAGACAATGGTCCAAGTGCAATTAGGAGTGAGCTTGGGCGTGCAAAATACGCGTTCAAAAGTTTAGCAGACTTTTCCCCAAAAAAGACTAAGGAATCAAATAAAAAATCTTCGAGCAAAAAACAAGTGAAGAAAAAGGGTTTCCAGTTGCCTGTGAATGATGCAATCGAGGTTAATTCTGATGAGCAGCATGATGTAGATGACTTGCTCTCGCAAGCACCAGATTCCTTTTCTACTCCTGTCACTGGAAGCTTGAGCCCGGCTGTCAGAATATGCTCCATGAATGAACAAGGGGCTTTGAAGGACAAACTTGTTGATGAGGCCACAGGGAACAGTGAGGACAGAAAACCAACAATTTTACAGCTTAAAAGCAAGAAGGTCAATGACAATGGCACAAGCGAGGATGTGGGCAAAGGTGCTAGCAAACCAAAGATTATGAAGGGAACCAAGTTAGTCATACACTTGGGTGGACGGAATAAAACCATGACCAATTCTCCAAGGTCCGATTCTTCAAGCTATCAGAGGGAACAAGAGTTGTTGACACAAAGTGGTAGTGAAGCAGTGAGTCAACAAAGAATGGTTGATTACATAGCAGACAAATCTGATGGCACAGCTACCTCTGATGATGGTAACAAAGTAGACAGCCCCCAGGAAATAAAAGGGCTGAATCCAAGGGAGCGTAACATAATAAAGCTTGGTACAGTAGGGCTTCAAAACAATGTATCGAAGAGTGAGAAGGTGTCTTTGAGAAAGCATCCAGAGAACAGGTCCGACATATCTATTGATGGTAACAAAAGTAAAAAGCAAGAGCCTCTGCAATCAGATCCTTTGACAAAGGATTCCAGGCCCTTGCTAAGACTCAAATTCAAGACCCCTTATCCAGGATCCTGGCCTGTGCAAGGTGAGGAAGAAAGGGGATCCATCAAAGGTCAACGGTCCAAGAGAAAGAGACCTTCCCCCTTGGTAGAAAAGCCTACACAACAGGAAAGGGAAGATGTGAAGGAGTCGCAAGATGACAGTTTAATGAATGAGATTATGGATGCCAATTGGGTTTTGAAAAAGTTGGGCAGAGATGCTATAGGGAAGAGAGTAGAAGTTCATCAGTCGTCTGATAATTCTTGGCATAAAGGAGTTGTTGGTGATGTCATTGAGGGGACATCGCGATTGTCTATTGATCTCGATGACGGAAGAACCAAGATGTTGGAACTTGGAAAGCAAGGCATTCGATTTGTTCCACAGAAGGATAAGAGACTAAAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48071.p1 GENE.S_Transcript_48071~~S_Transcript_48071.p1 ORF type:complete len:812 (+),score=177.54,PHD|PF00628.25|0.00017,PHD|PF00628.25|0.00034,PHD|PF00628.25|1.3e+04,PHD|PF00628.25|9.5e-07 S_Transcript_48071:156-2591(+)
MAFHVACPITCKRICYCSLGFGPALQTSRGKSDFLNGIDLIDKFLTDPWLIRVKEGTTVQVAVPKLAPPPPPPPPVSAADEEAAAAVAAAEELLSAQTKRAALQKKAAVASMAAEDFARRFESGALVDVPKDSTGEDQGQGNVNVMCRLCFSGENEGSERARRMLPCRSCGKKYHRSCLKTWSQHRDLFHWSSWTCPSCRVCEVCRRAGEPNKFKFCKRCDGAIHCYCMQPPHKNVSSGPFLCSKHTKCHSCGSNVPGNGMSLRWFLGYTCCDACGRLFTKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCQCDGISDERYLQFQIDGNLPYTCPTCRGECYQVRDLEDAVQELWRRRDEADRDLIAGLRAAAGLPTDDEYFSISPFSDDEDNGPSAIRSELGRAKYAFKSLADFSPKKTKESNKKSSSKKQVKKKGFQLPVNDAIEVNSDEQHDVDDLLSQAPDSFSTPVTGSLSPAVRICSMNEQGALKDKLVDEATGNSEDRKPTILQLKSKKVNDNGTSEDVGKGASKPKIMKGTKLVIHLGGRNKTMTNSPRSDSSSYQREQELLTQSGSEAVSQQRMVDYIADKSDGTATSDDGNKVDSPQEIKGLNPRERNIIKLGTVGLQNNVSKSEKVSLRKHPENRSDISIDGNKSKKQEPLQSDPLTKDSRPLLRLKFKTPYPGSWPVQGEEERGSIKGQRSKRKRPSPLVEKPTQQEREDVKESQDDSLMNEIMDANWVLKKLGRDAIGKRVEVHQSSDNSWHKGVVGDVIEGTSRLSIDLDDGRTKMLELGKQGIRFVPQKDKRLKS*

Click here to download the sequence:
Link to NCBI Protein BLAST