Transcript Information: S_Transcript_48076.p1


Annotated TAIR IDAT5G49710.3
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20195561-20197188 | Forward length=235
E-Value4.5E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6187775092677
Replicate 28.3449929414434
Replicate 35.9246095190841
Condition 2: 8 Hour
Replicate 17.9555860250444
Replicate 27.3027277943149
Replicate 34.9700162809542
Condition 3: 24 Hour
Replicate 18.1493865871647
Replicate 27.5154608336074
Replicate 36.9262608988143


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48076.p1 GENE.S_Transcript_48076~~S_Transcript_48076.p1 ORF type:complete len:193 (+),score=24.33 S_Transcript_48076:262-840(+)
ATGTCGATTCTTCCGAACAAGACGATGATGACGATAATATTACCGATGACGACGTCGATCGCCAGGGAGTTGACGACAGAGAGTCTTGTGATGGATCGTCTTCTCCCTGTACAGATCGTGAGGCCGAACAAGGTGGACGGACCGGAATTCATTGAAAAGTTGGAAACTGCTCGAATTTCCGCTCAACGGACTGTTCCCGAAGAGGGCGGTTCTTGGGACGTGGTGAGCCATAGTGATTTATGGGAAGGTGGGAGTGTTGATATGGATGAAGAAGACTATATTGTTGTTCAACAAGAGGATATCATGGATGGGATTGCCTGCTTTATGGCTGCCTATCTATTGTCTCTTAAACAGACTAAGGACCTGACTCCTAACCAGCTTCAGGAAGCTCTTAGCAAAACTTTTTCTGTAAAGAAGAAGAAAGGAAAGCTACGGAAAGCATTGGATGGTAGTAAAGTCATTTATAATGTTGCGTCCTGGAGTGCAACTGCAATTGGGATTTACCAAAATCCTGCACTTCTTAGAGCTGCTACGACAGCCTTCTGGACCTCATGCCGTGTCATATCAAGGCTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48076.p1 GENE.S_Transcript_48076~~S_Transcript_48076.p1 ORF type:complete len:193 (+),score=24.33 S_Transcript_48076:262-840(+)
MSILPNKTMMTIILPMTTSIARELTTESLVMDRLLPVQIVRPNKVDGPEFIEKLETARISAQRTVPEEGGSWDVVSHSDLWEGGSVDMDEEDYIVVQQEDIMDGIACFMAAYLLSLKQTKDLTPNQLQEALSKTFSVKKKKGKLRKALDGSKVIYNVASWSATAIGIYQNPALLRAATTAFWTSCRVISRLF*

Click here to download the sequence:
Link to NCBI Protein BLAST