Transcript Information: S_Transcript_48081.p1


Annotated TAIR IDAT5G49710.3
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20195561-20197188 | Forward length=235
E-Value3.5E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9362824871706
Replicate 24.7150316393076
Replicate 35.3543427339485
Condition 2: 8 Hour
Replicate 15.3313475792832
Replicate 26.314634696697
Replicate 37.4777368614249
Condition 3: 24 Hour
Replicate 16.2539787412588
Replicate 25.3004075460812
Replicate 34.6782824299812


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48081.p1 GENE.S_Transcript_48081~~S_Transcript_48081.p1 ORF type:complete len:248 (+),score=49.55 S_Transcript_48081:361-1104(+)
ATGGAGATGGGAGAAGGGAGTGAATCGTCTTCACCGCAAATTGGGAGGAGAGAGAAACAGAAAGATAAAGAACAACTCAGAGTTAAAAGGAAGACTCTAAAGGCTGTGCTTGAGCAGTGCCAAAGAGCTCTCGAATCCCTAGACATCGATTCTTCCGAACAAGACGATGACGACGATAATATTACCGATGATGACGTTGATCGTCAGGGATTTGACGACAGAGAGTCTTGTGATGGATCGTCTTCTCCCTGTACAGATCGTGAGGCCGAACAACTGTGTGTTATGATCAAATCTAGGGTGGACGGACCGGAATTCATTGAAAAGTTGGAAACTGCTCGAATTTCCGCTCAACGGACTGTTCCCGAAGAGGGCGGTTCTTGGGACGTGGTGAGCCATAGTGATTTATGGGAAGGTGGGAGTGTTGATATGGATGAAGAAGACTATATTGTTGTTCAACAAGAGGATATCATGGATGGGATTGCCTGCTTTATGGCTGCCTATCTATTGTCTCTTAAACAGACTAAGGACCTGACTCCTAACCAGCTTCAGGAAGCTCTTAGCAAAACTTTTTCTGTAAAGAAGAAGAAAGGAAAGCTACGGAAAGCATTGGATGGTAGTAAAGTCATTTATAATGTTGCGTCCTGGAGTGCAACTGCAATTGGGATTTACCAAAATCCTGCACTTCTTAGAGCTGCTACGACAGCCTTCTGGACCTCATGCCGTGTCATATCAAGGCTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48081.p1 GENE.S_Transcript_48081~~S_Transcript_48081.p1 ORF type:complete len:248 (+),score=49.55 S_Transcript_48081:361-1104(+)
MEMGEGSESSSPQIGRREKQKDKEQLRVKRKTLKAVLEQCQRALESLDIDSSEQDDDDDNITDDDVDRQGFDDRESCDGSSSPCTDREAEQLCVMIKSRVDGPEFIEKLETARISAQRTVPEEGGSWDVVSHSDLWEGGSVDMDEEDYIVVQQEDIMDGIACFMAAYLLSLKQTKDLTPNQLQEALSKTFSVKKKKGKLRKALDGSKVIYNVASWSATAIGIYQNPALLRAATTAFWTSCRVISRLF*

Click here to download the sequence:
Link to NCBI Protein BLAST