Transcript Information: S_Transcript_48083.p1


Annotated TAIR IDAT3G50220.1
Annotated Gene NameProtein of unknown function (DUF579)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18617672-18618640 | Reverse length=322
E-Value1.3E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5164325956395
Replicate 22.1201479454669
Replicate 31.9384257144926
Condition 2: 8 Hour
Replicate 11.9212063348768
Replicate 22.4857609599696
Replicate 32.9445315009884
Condition 3: 24 Hour
Replicate 13.2800125361253
Replicate 22.2459633093678
Replicate 33.7113518794315


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48083.p1 GENE.S_Transcript_48083~~S_Transcript_48083.p1 ORF type:5prime_partial len:333 (+),score=35.78,Polysacc_synt_4|PF04669.9|3.4e-70 S_Transcript_48083:3-1001(+)
CCCATATTATTTTTTTTTTCTCATCATATAATTTTTCCAAAAGACATGAAGAACAACAATAATAACAACAACAATACAAAGCTTATTCTCCTGCACCCTTACATACTAAAACAAGGGAGCTCAAATAGGCTATGGCTTTTGGCCTTCATATCCTTATTCACACTCATATTCCTCCTTACTCTCATCTACACCCGAGACTCGTTCGCTGCCCCCTCTACTGCCTCCACCTCCGCCGCTGCCACCACCGGAGCTTCTGCCACCACATTGGGTGGAAGCTCCGGCGGTGACCCGTTGCCTAAGCATGTCCTTAGCACGCTCCTCCACTATGCTTCCAATGCTAATACTACGGAGAAGATGGGGCTTTCTGATCTTAAGCCCATTTCCGACGTCGTTAGACGGTGTCCTTCGCCGTGTAACTTCCTTGTGTTTGGCCTGACCCATGAGACTCTCCTTTGGCGGGCTCTTAACAGCCATGGCCGGACTGTTTTCATTGATGAGAACAGGTACTATGCTGCTTATATGGAGGAGAAACACCCAGAAATTGAGGCCTATGATGTACAATACACAACAAAGCTAAGTGAGTTCAAAGAGTTGATATTCTCTGTAAAGGAGCAATCCCACAATGAGTGTAGGCCGGTCCAAAATTTGCTCTTCTCCGAGTGTAAATTAGGCATCAACGACCTCCCCAACCAATTTTACGACATCGACTGGGACGTGATCCTAGTCGATGGGCCTCGTGGGCACTGGCCCACGGCCCCAGGTCGAATGTCCGCTATTTTCACAGCGGGCGTTCTTGCAAGAAGTAAGAAGGCTTCTGCAAGAAGTGCTAGGACTCATGTCTTTGTGCATGACTACAATTTGAAGCCCCAAAGAGTTTCAAGTGAAGAGTTTTTGTGCAAGGAAAACTTGGTGGAAGATAATGGGATGCTTGGACATTTTGTCTTGGAGAGGATGGATGAGAACAGTTTTCAATTTTGCAACAAGAAGAAATCTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48083.p1 GENE.S_Transcript_48083~~S_Transcript_48083.p1 ORF type:5prime_partial len:333 (+),score=35.78,Polysacc_synt_4|PF04669.9|3.4e-70 S_Transcript_48083:3-1001(+)
PILFFFSHHIIFPKDMKNNNNNNNNTKLILLHPYILKQGSSNRLWLLAFISLFTLIFLLTLIYTRDSFAAPSTASTSAAATTGASATTLGGSSGGDPLPKHVLSTLLHYASNANTTEKMGLSDLKPISDVVRRCPSPCNFLVFGLTHETLLWRALNSHGRTVFIDENRYYAAYMEEKHPEIEAYDVQYTTKLSEFKELIFSVKEQSHNECRPVQNLLFSECKLGINDLPNQFYDIDWDVILVDGPRGHWPTAPGRMSAIFTAGVLARSKKASARSARTHVFVHDYNLKPQRVSSEEFLCKENLVEDNGMLGHFVLERMDENSFQFCNKKKSS*

Click here to download the sequence:
Link to NCBI Protein BLAST