Transcript Information: S_Transcript_48104.p1


Annotated TAIR IDAT1G06550.1
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2003834-2006564 | Reverse length=387
E-Value1.4E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.050304072378
Replicate 220.975187255384
Replicate 313.637234428014
Condition 2: 8 Hour
Replicate 111.263410378767
Replicate 28.8227008720049
Replicate 311.3584446158
Condition 3: 24 Hour
Replicate 116.563139360239
Replicate 220.642157022589
Replicate 317.347556363143


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48104.p1 GENE.S_Transcript_48104~~S_Transcript_48104.p1 ORF type:complete len:426 (+),score=84.36,ECH_2|PF16113.1|2e-109,ECH_1|PF00378.16|7.4e-30 S_Transcript_48104:581-1858(+)
ATGCTTTCATTTTATAAACAACTCCATACATGTTCTTTCTTAGCTACCAAAATCACAACCCATCTGTCCCGTTCCTCTTACTGTCCATTGGCTTATTTTGGGACTTCATCGAAAATGGCACAAATGACAAACTCTGATGAACCAGTTGTTCTTGGAGAGGAAGTAGGCCGTGTGAGATTGGTTACATTGAATCGTCCTCGTCAACTCAATGTGATTTCATCTGAAACAGTGAAGATTTTGGCAGGATATTTGGAAAACTGGGAGAAGGATGACAATGCTGAACTTATACTAATCAAGGGAGCAGGTCGTGCGTTTTCAGCAGGAGGAGATCTACGTATGTTCTATGAGGGCAAGAAAACAAAGGACTCTTGCCTTGAAGTGGCTTACAGGATGTACTGGCTTTGCCATCATATACACAGCTACAAGAAAACTCAGGTTGCTCTAGCTAATGGAATTTCCATGGGTGGAGGTGCCTCTTTGATGGTTCCAATGAAATTTTCGGTTGTGACAGAAAAAACTGTTTTTGCCACTCCTGAAGCTGGTATCGGATTTCATACTGACTGCGGCTTCTCATACATACATTCACGATTGCCTGGTCGTTTAGGTGAATACTTGGCTTTGACTGGAGCAAGATTGAATGGCAAGGAATTGGTTGCAGCTGGACTGGCTACCCATTTTGTGCCTTCAAAGAAATTGGCTGAGCTGGAGAAGAGCCTGGTGAGCTTAAACAAGGGTGACAGGGATGCTGTTAAGTCATTGATTGAAGAGTTCTCTTCAAAAGTTGAGATTGATGCAGATAGTATTTTGAACAAGCAATCTATTATTGATGAATGCTTTTCCAAGGATTCAGTGGAGGAGATTATTCAAGCCTTTGAAGCTGAGACGTTCAAAGAAGGAAATGGATGGATGGGCCCAGTACTTAAGGGTTTAAAAAGATCATCTCCAACTGGACTAAAGATGACTCTACGATCGATACGCAAAGGACGGAATCAAACGCTGGCTGAGTGCCTCAAAAAAGAGTTCAGACTGACAATAAACACTTTACGGTGTACTATATCTTCTGATATGTATGAGGGTATCAGAGCTCTCACCATTGACAAGGATAACACTCCCAAGTGGGATCCACCAAGCCTTGACAAAGTAAAGGATGAGGACTTAGACTTAGTATTTCAGCCATACGAAACTCATCTGGAACTTCAGATCCCAGAAAAGGAAGAATGCAGGTGGGATGGAAAGTATGAGAAATCTGCTTATGCGACAGCAAAGGCAACAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48104.p1 GENE.S_Transcript_48104~~S_Transcript_48104.p1 ORF type:complete len:426 (+),score=84.36,ECH_2|PF16113.1|2e-109,ECH_1|PF00378.16|7.4e-30 S_Transcript_48104:581-1858(+)
MLSFYKQLHTCSFLATKITTHLSRSSYCPLAYFGTSSKMAQMTNSDEPVVLGEEVGRVRLVTLNRPRQLNVISSETVKILAGYLENWEKDDNAELILIKGAGRAFSAGGDLRMFYEGKKTKDSCLEVAYRMYWLCHHIHSYKKTQVALANGISMGGGASLMVPMKFSVVTEKTVFATPEAGIGFHTDCGFSYIHSRLPGRLGEYLALTGARLNGKELVAAGLATHFVPSKKLAELEKSLVSLNKGDRDAVKSLIEEFSSKVEIDADSILNKQSIIDECFSKDSVEEIIQAFEAETFKEGNGWMGPVLKGLKRSSPTGLKMTLRSIRKGRNQTLAECLKKEFRLTINTLRCTISSDMYEGIRALTIDKDNTPKWDPPSLDKVKDEDLDLVFQPYETHLELQIPEKEECRWDGKYEKSAYATAKATE*

Click here to download the sequence:
Link to NCBI Protein BLAST