Transcript Information: S_Transcript_48106.p1


Annotated TAIR IDAT1G06550.1
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2003834-2006564 | Reverse length=387
E-Value2.1E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.81113196902628
Replicate 30
Condition 2: 8 Hour
Replicate 10.15680434056715
Replicate 20.65799554822725
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.1127372531669


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48106.p1 GENE.S_Transcript_48106~~S_Transcript_48106.p1 ORF type:complete len:136 (+),score=16.16,ECH_2|PF16113.1|2.8e-17,ECH_1|PF00378.16|2.6e-10 S_Transcript_48106:581-988(+)
ATGCTTTCATTTTATAAACAACTCCATACATGTTCTTTCTTAGCTACCAAAATCACAACCCATCTGTCCCGTTCCTCTTACTGTCCATTGGCTTATTTTGGGACTTCATCGAAAATGGCACAAATGACAAACTCTGATGAACCAGTTGTTCTTGGAGAGGAAGTAGGCCGTGTGAGATTGGTTACATTGAATCGTCCTCGTCAACTCAATGTGATTTCATCTGAAACAGTGAAGATTTTGGCAGGATATTTGGAAAACTGGGAGAAGGATGACAATGCTGAACTTATACTAATCAAGGGAGCAGGTCGTGCGTTTTCAGCAGGAGGAGATCTACGTATGTTCTATGAGGGCAAGAAAACAAGTAAGTATTGTGTCCATCCTTTGATGTGCTTTTCATCGTTGATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48106.p1 GENE.S_Transcript_48106~~S_Transcript_48106.p1 ORF type:complete len:136 (+),score=16.16,ECH_2|PF16113.1|2.8e-17,ECH_1|PF00378.16|2.6e-10 S_Transcript_48106:581-988(+)
MLSFYKQLHTCSFLATKITTHLSRSSYCPLAYFGTSSKMAQMTNSDEPVVLGEEVGRVRLVTLNRPRQLNVISSETVKILAGYLENWEKDDNAELILIKGAGRAFSAGGDLRMFYEGKKTSKYCVHPLMCFSSLI*

Click here to download the sequence:
Link to NCBI Protein BLAST