Transcript Information: S_Transcript_48110.p1


Annotated TAIR IDAT5G11980.1
Annotated Gene Nameconserved oligomeric Golgi complex component-related / COG complex component-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3868809-3872146 | Reverse length=569
E-Value2e-323
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.572288161921
Replicate 29.6713598060339
Replicate 39.2529480693407
Condition 2: 8 Hour
Replicate 113.145788551657
Replicate 212.373471079849
Replicate 313.68740214361
Condition 3: 24 Hour
Replicate 19.0895662469424
Replicate 28.1108503757819
Replicate 37.903483092699


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48110.p1 GENE.S_Transcript_48110~~S_Transcript_48110.p1 ORF type:complete len:584 (+),score=121.07,Dor1|PF04124.8|6.1e-146,Vps51|PF08700.7|7e-11,Vps51|PF08700.7|5.2e+03,Vps51|PF08700.7|1.5e+03,Vps51|PF08700.7|2e+03 S_Transcript_48110:186-1937(+)
ATGGAGACGACATCAACAGCAAACACAGAAGAGAATGGAGAAGTGGCAGGTCTCATACCTCTGGCTTCAGTTTCTCAGCAACCTTACGTCTCCGAACTCCTCTCTTTCACTCTCGATCGCCTTCACAAGGAACCGGAGCTACTGCGAGTGGATGCGGAGAGAATACGGCGACAAATGCAAGAAGTGGCGGTGAGCAATTACCGCTCTTTTATATCTGCTGCTGATGCGTTGCTTTCTATTCGCCAAGAGGTTTCCTCCATTGATCAACACCTTGAATCTCTGATAGCTGAAGTTCCAAAGCTGACAAGTGGTTGCACTGAGTTCATTGAATCGGCTGAACAAATTTTGGAGAAGAGGAAGATGAACCAAATGTTGCTCGCAAATCATAGTACTTTGCTTGACTTGCTTGAAATCCCTCAGCTTATGGACACGTGTGTGAGAAATGGAAATTACGATGAAGCTCTTGACTTGGAGGCTTTTGTCAGCAAATTATGTACCATGCATCCTAAGATTCCTGTGATTCAAGCTTTGGCTGAAGAGGTTAAGCAGACAACTCAGTCTTTACTCTCGCAGCTTCTCCAGAAGCTTAGGTCAAACATTCAGTTGCCAGAATGTCTTCGTATCATTGGATATTTACGTCGAATTGGTGTATTTAGCGAGTATGAAATGCGCTTGCAGTTCCTGAGATGTAGAGAGGCATGGCTCACTGGAATCCTTGATGATTTGGACCAAAGAAACCCTTATGAATACTTAAAGGGAATGGTGAACTGTCATAGGATGCATTTATTTGATGTTGTCAACCAATACCGAGCTATATTTGCGGATGATACATCTGGAAGTGAGGAGAATTATGATGGAGGGCTTCTCTTTAGTTGGGCTATGCATCAAATAACATCTCACATTCGAATCCTTAAGGTTATGCTTCCTAAGATAACCGAAGGGGGGTCTTTGTCAAACGTTTTGGATTCATGCATGTATTGTGCTATGGGGCTTGGTTGGGTTGGATTGGATTTCAGAGGTCTGCTTCCTTCACTATTCGAAGAGGCTGTTCTCAACTTATTTATGAGGAATATCTCGACTGCTATTGAGAATTTTCAGCTGGTCCTGGATTCACATCGCTGGGTACCGTTGCCAGCTGTTGGTTTTTCAGGTGCTACTATCAGTGAAGATAGTCAAGAGGATGTGACTCCACCTTCTTATTTGATGGAGCATCCACCCCTTGCTGTATTTATAAATGGTGTATCAGCAGCCATGAATGAGCTACGTCCATGTGCCCCTGTAAGCTTGAAACATATTCTTGCTCAAGAATTAGTCAAGGGGTTGAAAGCTGTTCATGACTCATTACTCAGATATAACGAGACTCGGATGCTTAGGGAGAATGAATCTGTCCTATTCTTCTCACTTTGCCGGGCATTCATGGAGGTTGCGTTTCCCCATTGTGCAACTTGCTTTGGTCGCTGCTACCCTGGTGGTGCGGCTCTTATCATGGATGCCAAGGTTTCATTTGACGGAATATCCCGTCTGCTATCTGTCTCATCATCCAGAGAAATTCCTCGACGAACCCGAAGCGCTGATATGCCCACCACCAAATCAGAAGATAGTGGGAGCTTGGATATAGAAGAAAATCCAGCCTTGCTTAAGGTGGAAAACGGAGTTGTTCCCGATAAAGAACAAGAAGGCCAAACCATTTTAGCCGAGGATGGACAGAATGTTGAACATTCAGAAGCTGAAAAGAAAGATGGTGATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48110.p1 GENE.S_Transcript_48110~~S_Transcript_48110.p1 ORF type:complete len:584 (+),score=121.07,Dor1|PF04124.8|6.1e-146,Vps51|PF08700.7|7e-11,Vps51|PF08700.7|5.2e+03,Vps51|PF08700.7|1.5e+03,Vps51|PF08700.7|2e+03 S_Transcript_48110:186-1937(+)
METTSTANTEENGEVAGLIPLASVSQQPYVSELLSFTLDRLHKEPELLRVDAERIRRQMQEVAVSNYRSFISAADALLSIRQEVSSIDQHLESLIAEVPKLTSGCTEFIESAEQILEKRKMNQMLLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAFVSKLCTMHPKIPVIQALAEEVKQTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILDDLDQRNPYEYLKGMVNCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHIRILKVMLPKITEGGSLSNVLDSCMYCAMGLGWVGLDFRGLLPSLFEEAVLNLFMRNISTAIENFQLVLDSHRWVPLPAVGFSGATISEDSQEDVTPPSYLMEHPPLAVFINGVSAAMNELRPCAPVSLKHILAQELVKGLKAVHDSLLRYNETRMLRENESVLFFSLCRAFMEVAFPHCATCFGRCYPGGAALIMDAKVSFDGISRLLSVSSSREIPRRTRSADMPTTKSEDSGSLDIEENPALLKVENGVVPDKEQEGQTILAEDGQNVEHSEAEKKDGDS*

Click here to download the sequence:
Link to NCBI Protein BLAST