Transcript Information: S_Transcript_48124.p1


Annotated TAIR IDAT3G26560.1
Annotated Gene NameATP-dependent RNA helicase, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9750122-9753719 | Reverse length=1168
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.886316228762
Replicate 216.982194990087
Replicate 317.502230020373
Condition 2: 8 Hour
Replicate 118.827515913453
Replicate 218.931397016247
Replicate 317.375388127407
Condition 3: 24 Hour
Replicate 120.24350557734
Replicate 217.715696538962
Replicate 317.605187967236


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48124.p1 GENE.S_Transcript_48124~~S_Transcript_48124.p1 ORF type:complete len:1255 (+),score=299.47,HA2|PF04408.19|2.8e-25,OB_NTP_bind|PF07717.12|1.5e-24,S1|PF00575.19|4.5e-11,Helicase_C|PF00271.27|3.1e-10,DEAD|PF00270.25|1.3e-06 S_Transcript_48124:217-3765(+)
ATGGCGGCAAAAGAGGGGGAAACCAAAGACGAAGCATTGAAGAAGCTAGAGTACCTATCACTGGTCTCAAAGGTATGTTCCGAACTCGAAACTCACGTAGGGTTTGGCGACAAAGTAGTGGCCGAATTCATCACCGATTTAGGGCATAAATGCGAGACTGTTGATGAATTCGACGCCAAATTGAAGGAAAACGGTGCTGAGATGCCTGATTACTTTGTTCGTACTTTGTTGACTATTATTCATGCTATTTTGCCCCCTAACCCTAACAAGTCTAAAAAGAAGGACGGTGGTGGTGGTGGTGATAGTAATTCGAAGTTTTCAGGGTTGGCTATTGCTGATAGTAGAGATAGGGTTAAGGAGTTGGAGAGAGAGATTGAGATGGAAGCCGATGAACGGCGAAAGAGGGATGGTGGTGATGATGAGAGGAGAGATGATGATGATGATAGAAAAAATCGACGATATGATAGGGATAGGGATAGGGATAGGGGGAGAGGTAAGGATAGGGATAGAGATTATAGGAGAGAGAGTCGCCATGACAGGTCCGAAAGATATAGGGAAAGAGAGGAGGATATGGGGCATGATGATCGACGACATAGGGGGCGTAGGTATGAGGATGAGGATGGAGGAGATAGGAGGAGGGGTGATAGGAATGGGAGGCATCATCATTGTTCGGAGGAGCTTGAGATGTTTCAGATTTATAAGGGGAGGGTTTCAGGATTGAGCAAGAATGGTTGTTTTGTTCAGTTGCTAGATTTCAAGGGGAAAGAAGGGTTAGTTCATGTTTCACAGATGGCTACTAGGCGGATTGCGAGTCCTACTGATGTTGTTAAGAGGGGTCAGGAGGTTTTTGTGAAGTTGTTATCTGTTAAAGGGGACAAGTTGAGTTTCTCCATGTGTGATGTGGATCAGGATACTGGGAAAGATTTGAAGCCTATCAAGCAGAGGTCAGAGGATGAGGGTTTAAGGGCCAATCCTGCTAGTGGTAGTAATGGGCCTAGAACTAGGACAGGTATTTCGGGGATTAGGATTGTGGAGGAGGATGATTCTGGCCCCTCACGTCGACCTTTGAAGCGGATGAGTTCACCGGAAAAGTGGGAGACTAAGCAGCTTATTGCGTCGGGTGTTTTGAGTGTGAAGGAGCATCCCACTTTTGATGATGAAGGGGATGGGGTGATTTACCAAGAAGAGGGTGCTGAAGAAGAGCTCGAGATAGAGATGAATGAAGATGAACCTCCATTTTTAAATGGGCAGACTCGATATTCTGTTGACATGTCGCCTGTTAAGATTTTTAAGAATCCGGAGGGATCTTTGAGTCGCGCAGCTGCTCTACAGTCTGCTCTGATAAAGGAAAGGAGAGAAGTACGGGAGCAGCAACAGAGAACAATGCTTGATTCCATTCCTAAGGATCTTAATCGTCCGTGGGAAGATCCCATGCCCGAGACAGGGGAGAGGCATCTTGCGCAGGAGCTGAGGGGTGTTGGCTTATCAGCATATGATATGCCAGAATGGAAGAAGGAAGCCTACGGTAAGGCTCTGACTTTTGGGCAGAAATCCAAGCTCTCAATCCAGGAACAAAGGCAGAGCTTGCCAATCTACAAGTTAAAGAAAGAACTGATTCAAGCTGTGCACGATAATCAGGTTCTAGTTGTGATTGGTGAGACCGGATCAGGGAAAACAACCCAGGTAACTCAATACCTTGCTGAAGCAGGTTACACCACTAGGGGTAAAATTGGATGTACTCAGCCCCGTCGTGTAGCTGCTATGTCTGTGGCCAAGAGGGTTGCTGAGGAGTTTGGATGTCGATTAGGAGAGGAGGTTGGATATGCTATTCGGTTTGAGGACTGTACTGGTCCTGACACTGTGATTAAGTATATGACTGATGGTATGCTTCTTAGGGAAATCCTGATTGATGAAAATCTTGCTCAGTACTCAGTAATAATGCTTGATGAAGCTCACGAGAGAACTATACATACAGATGTCCTTTTTGGTCTATTGAAAAAGCTTGTTAGAAGGAGGCCTGATCTTCGTTTGATTGTCACATCAGCTACTTTGGATGCTGAGAAGTTTTCTGGATATTTCTTCAACTGTAATATCTTCACTATCCCCGGAAGAACTTATCCTGTGGAGATTTTGTATACTAAGCAACCTGAGACTGATTATCTGGATGCCGCTTTAATCACTGTGCTGCAAATACACCTGACAGAACCTGAAGGTGACGTTCTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCTTGCCAGTGTCTCTATGAAAGGATGAAAGCCCTAGGAAAAAATGTTCCTGAACTGATAATTCTTCCAGTTTACAGTGCTCTTCCTAGCGAAATGCAATCTAGGATTTTCGAGCCTGCCCCTCCTGGAAAAAGGAAAGTAGTTGTGGCTACAAACATTGCGGAAGCTTCTTTGACCATTGATGGGATATTTTATGTGGTTGACCCTGGATTTGCTAAGCAAAATGTATATAACCCAAAACAGGGGCTTGATTCCCTGGTTATTACCCCAATTTCGCAAGCATCTGCCAAGCAAAGAGCTGGTCGTGCTGGGCGTACTGGACCTGGTAAATGCTATCGTCTTTATACGGAGAGTGCCTACAAAAACGAAATGTCTCCAACCTCAATTCCAGAAATTCAGCGGATAAATCTTGGGATGACGACACTGACCATGAAAGCTATGGGGATCAATGATCTGCTGTCCTTTGATTTTATGGATCCGCCTCCTCCTCAAGCACTTATTTCTGCTATGGAGCAGTTGTATAGTCTCGGAGCTTTGGATGAGGAAGGCCTTTTGACCAAATTGGGCCGGAAGATGGCAGAATTTCCCTTGGAACCACCGCTGTCTAAGATGCTGCTGGCCAGTGTTGACCTTGGATGCAGTGATGAGATTTTGACGATAATTGCAATGATCCAAACAGGGAATATCTTCTACAGGCCCAGGGAGAAGCAAGCACAAGCAGACCAAAAGAGGGCCAAATTTTTCCAGCCGGAGGGCGATCATCTGACATTGCTTGCTGTTTACGAGGCTTGGAAAGCAAAGAATTTTTCTGGACCATGGTGCTTTGAAAATTTCATCCAGTCTCGATCATTGAGAAGGGCACAAGATGTCAGGAAACAACTTCTCAGTATCATGGACAAGTATAAACTGGATGTCGTAAGCGCTGGTAAGAATTTCACCAAGATAAGGAAGGCGATTGCTGCTGGTTTTTTCTTTCATGCTTCCAGGAAGGATCCACAGGAAGGCTACAGAACCCTGGTCGAGAATCAGCCTGTTTACATCCACCCTAGCAGTGCATTGTTTCAGAGACAGCCAGATTGGGTCATATACCATGAGCTGGTTATGACCACAAAAGAATATATGAGGGAGGTGACTGTCATTGACCCTAAGTGGCTGGTTGAGTTAGCTCCTAGATTTTTCAAAGTAGCAGATCCCACAAAAATGAGCAAGCGCAAGCGTCAAGAACGTATTGAGCCACTTTATGATAGATATCATGAGCCTAACTCATGGCGTCTAAGCAAAAGGCGTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48124.p1 GENE.S_Transcript_48124~~S_Transcript_48124.p1 ORF type:complete len:1255 (+),score=299.47,HA2|PF04408.19|2.8e-25,OB_NTP_bind|PF07717.12|1.5e-24,S1|PF00575.19|4.5e-11,Helicase_C|PF00271.27|3.1e-10,DEAD|PF00270.25|1.3e-06 S_Transcript_48124:217-3765(+)
MAAKEGETKDEALKKLEYLSLVSKVCSELETHVGFGDKVVAEFITDLGHKCETVDEFDAKLKENGAEMPDYFVRTLLTIIHAILPPNPNKSKKKDGGGGGDSNSKFSGLAIADSRDRVKELEREIEMEADERRKRDGGDDERRDDDDDRKNRRYDRDRDRDRGRGKDRDRDYRRESRHDRSERYREREEDMGHDDRRHRGRRYEDEDGGDRRRGDRNGRHHHCSEELEMFQIYKGRVSGLSKNGCFVQLLDFKGKEGLVHVSQMATRRIASPTDVVKRGQEVFVKLLSVKGDKLSFSMCDVDQDTGKDLKPIKQRSEDEGLRANPASGSNGPRTRTGISGIRIVEEDDSGPSRRPLKRMSSPEKWETKQLIASGVLSVKEHPTFDDEGDGVIYQEEGAEEELEIEMNEDEPPFLNGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLAQYSVIMLDEAHERTIHTDVLFGLLKKLVRRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTYPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQCLYERMKALGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVVDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYKNEMSPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPPPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAIAAGFFFHASRKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA*

Click here to download the sequence:
Link to NCBI Protein BLAST