Transcript Information: S_Transcript_481655.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17624504129259
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.28245550088918
Replicate 20.14815793801144
Replicate 30.14116455367537
Condition 3: 24 Hour
Replicate 10
Replicate 20.15009146739303
Replicate 30.3340668133128


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_481655.p1 GENE.S_Transcript_481655~~S_Transcript_481655.p1 ORF type:5prime_partial len:151 (+),score=24.11,rve|PF00665.22|1.2e-16 S_Transcript_481655:2-454(+)
GTCATATGGGTGAGAAAGGTGTGGCTATGCTTTGTAAAGGTGGTTTGCTTGGCTCACTTACTAATTGTGATATTGATTTTTGTGAGCATTGTGTCTATGGCAAGCAAAAGAGAGAACTTCTCACCAGACATTCATAGGACCAAGGCGACACTTGACTATGTCCATTCCGACTTATGGGGTCCTTCACAAGTTTCCACCAACGGAGGTAATCGTTATATGATGACTATTATTGATGATTACTCACGTAAGGTTTGGGTGTATTTTTTGAAGAACAAGAATGAGGCTCTAGACAAGTTCAAGGAGTGGAAAACATTGCTTGAAATTCAAACCTGTAAGAAACTCAAGAGCTTGAGGACCGATAATGGCCTTGAGTTTTGTGATAGAGAGTTCAAAGAATTTTGCAAGAAGGAAGGTGTTGCTAGGCACCTCACAATTGTTGGCAGGCCACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_481655.p1 GENE.S_Transcript_481655~~S_Transcript_481655.p1 ORF type:5prime_partial len:151 (+),score=24.11,rve|PF00665.22|1.2e-16 S_Transcript_481655:2-454(+)
VIWVRKVWLCFVKVVCLAHLLIVILIFVSIVSMASKRENFSPDIHRTKATLDYVHSDLWGPSQVSTNGGNRYMMTIIDDYSRKVWVYFLKNKNEALDKFKEWKTLLEIQTCKKLKSLRTDNGLEFCDREFKEFCKKEGVARHLTIVGRPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST