Transcript Information: S_Transcript_481659.p3


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23975676788451
Replicate 20
Replicate 30.16615077552793
Condition 2: 8 Hour
Replicate 10.19212063348768
Replicate 20.40309637188697
Replicate 30.9601733155397
Condition 3: 24 Hour
Replicate 10.19680075216751
Replicate 20
Replicate 30.22722562527132


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_481659.p3 GENE.S_Transcript_481659~~S_Transcript_481659.p3 ORF type:complete len:111 (+),score=15.31,gag_pre-integrs|PF13976.2|1.3e-17 S_Transcript_481659:904-1236(+)
ATGAAAGGCTCAAGAAGTGGGTCGTTGTATGTCTTGCAAGGCTCTACCATCATGGGCTCCACTGCCATTGCTTCTACATTTACTACTGATGAATCCAAACTATGGCACATGCGTTTGGGGCATATGAGAGAAAAAGGTATGGATATTCTTTGTAAGCGTGGTTTGATTGGCTCTCTTTCACAATCCGAGATTGAATTTTGTGAGCATTGTGTTTATGGGAAACAAAAGAGAGTTAGCTTCTCTCCGAGTATCCATTGGACCAAGGATACCCTTGACTATGCTTACTCCAATTTTTGGGGTCCTTCACAAGTTGTTATAGTAGGTTGTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_481659.p3 GENE.S_Transcript_481659~~S_Transcript_481659.p3 ORF type:complete len:111 (+),score=15.31,gag_pre-integrs|PF13976.2|1.3e-17 S_Transcript_481659:904-1236(+)
MKGSRSGSLYVLQGSTIMGSTAIASTFTTDESKLWHMRLGHMREKGMDILCKRGLIGSLSQSEIEFCEHCVYGKQKRVSFSPSIHWTKDTLDYAYSNFWGPSQVVIVGCN*

Click here to download the sequence:
Link to NCBI Protein BLAST