Transcript Information: S_Transcript_482363.p1


Annotated TAIR IDATMG00240.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF111A
Annotation TypeHomolog
Chromosome PositionchrM:68918-69253 | Reverse length=111
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6508157498374
Replicate 22.5704220843707
Replicate 32.8648910421127
Condition 2: 8 Hour
Replicate 11.4492983710673
Replicate 24.1268458655806
Replicate 33.1042496512109
Condition 3: 24 Hour
Replicate 13.8175524546669
Replicate 23.3005550839341
Replicate 33.4282390453556


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_482363.p1 GENE.S_Transcript_482363~~S_Transcript_482363.p1 ORF type:5prime_partial len:103 (-),score=8.78 S_Transcript_482363:295-603(-)
AACGCGGCTCCGGTGCCTGTAGGATGTTGTAGTGAGACGGCGACCGCCGAGATCTACACTAGACCTAATTTGGCACGATCTATTAATGTCCTTAGCAGGTTTATGTCTAACATTGGGAAAGAATGTTGGCAAGGTGTGAAATGTGTCTTTCGCTATTTGAGAGGTACATCTGATGTTGGTTTGATTTATGGTAGTGGCACTCAGTATTTAGTTGCTAGTTATTCTGAATCTAATTATGCCAGAGATGTTGATAGTAGGAGGTCCATGACTATTTATGTGTTTGTTCTTGGTGGTTCTATGATCAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_482363.p1 GENE.S_Transcript_482363~~S_Transcript_482363.p1 ORF type:5prime_partial len:103 (-),score=8.78 S_Transcript_482363:295-603(-)
NAAPVPVGCCSETATAEIYTRPNLARSINVLSRFMSNIGKECWQGVKCVFRYLRGTSDVGLIYGSGTQYLVASYSESNYARDVDSRRSMTIYVFVLGGSMIS*

Click here to download the sequence:
Link to NCBI Protein BLAST