Transcript Information: S_Transcript_48242.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1043647107262
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.17546547952727
Replicate 30.083591559235221
Condition 3: 24 Hour
Replicate 10.085666209767036
Replicate 20.17775538491253
Replicate 30.19781995611856


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48242.p1 GENE.S_Transcript_48242~~S_Transcript_48242.p1 ORF type:complete len:255 (-),score=24.21,RVT_1|PF00078.23|1.6e-25 S_Transcript_48242:1031-1795(-)
ATGTTTGATAATGTCCTCTTCACTCATGAATCGACTCAACATTATGATGGAGGTAATATTTCCCCTAGAATTTTTATGAAGATTGATATTCGAAAAGCTTATGATACTCTGAATTGGGATTTCATTCATAGTATGCTTTGTCATCCTGGATTTCCTGAACAGTTTTTTAGCTGGATCATCTTATGCATTAGCACCTCTAGATTCTCAGTGAATATTAATGGTAGCCCTAGAGGATACTTTGAGGGGAAATGTGGCCTAAGGCAGCGAGATCCAATTTCCCCCTACATCTTTGTGATCAGTATGGAGGGACTTTCTAGAATGATGAGGAAGGCTGGAACTTTGAAACAATTTTCCTACCATCCAAAGACTGAGAGAGTTAGAGTTAACCATATTATCTTTGCTGATTATTTGCTCAGATTTACCAAAGGTGATGCTCCCTCAGTGAAGACTGTTCTAAGTTGTCTTAATTCTTTCTCTAACATGTCTGCATTGCAAATCAATCCAACAAAAACTGAGATATATATGGGAGGTGTGATACCAGAACTTAAGAGCCAGATTCTCTCAGCCTCAGGTTTTGTACAAGGGTCTCTCCTAGTGAGATATCTGGGTTTACCCTTTAGTTCAACAGGGCTCATACATGATATGTGTAAAAATCTGATAGAAAAAATAAGAAGAAAGTTGAATCATTGGAGCCTGCACACTTTGTCTCATGCAGAAAGACTGGAATTACTCAACTCAGTTTTGTTTGGTATAGAGAATTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48242.p1 GENE.S_Transcript_48242~~S_Transcript_48242.p1 ORF type:complete len:255 (-),score=24.21,RVT_1|PF00078.23|1.6e-25 S_Transcript_48242:1031-1795(-)
MFDNVLFTHESTQHYDGGNISPRIFMKIDIRKAYDTLNWDFIHSMLCHPGFPEQFFSWIILCISTSRFSVNINGSPRGYFEGKCGLRQRDPISPYIFVISMEGLSRMMRKAGTLKQFSYHPKTERVRVNHIIFADYLLRFTKGDAPSVKTVLSCLNSFSNMSALQINPTKTEIYMGGVIPELKSQILSASGFVQGSLLVRYLGLPFSSTGLIHDMCKNLIEKIRRKLNHWSLHTLSHAERLELLNSVLFGIENF*

Click here to download the sequence:
Link to NCBI Protein BLAST