Transcript Information: S_Transcript_48244.p1


Annotated TAIR IDAT3G45140.1
Annotated Gene Namelipoxygenase 2
Annotated Gene Symbol(s)LOX2, ATLOX2
Annotation TypeOrtholog
Chromosome Positionchr3:16525437-16529233 | Forward length=896
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.654458056233
Replicate 279.27605414471
Replicate 329.039220412336
Condition 2: 8 Hour
Replicate 117.513944460014
Replicate 223.15682578498
Replicate 319.890116569999
Condition 3: 24 Hour
Replicate 134.875164870949
Replicate 229.423193976311
Replicate 326.577176176882


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48244.p1 GENE.S_Transcript_48244~~S_Transcript_48244.p1 ORF type:complete len:912 (+),score=172.17,Lipoxygenase|PF00305.15|0,PLAT|PF01477.19|1.2e-05 S_Transcript_48244:264-2999(+)
ATGTTGCCTACAACCACCAGTAACATTCCCAAAAACCCCTCACCATTCACACTGCTACCAAAGGCCTTTCTAGTAGACCAAAATGTCCAACTATATAATACTGCAAGGGCAAAAAAGTCATTAAGATCTAATGCTAGAAGGAAAAATGCAGGTTTAAGTCATAAGACATGCAGGCGAGCTCAAAACGGCGGCGTTAAAGTGGCAGCATCAGTAGCAGCTACTGACTCTGAGAAAGCTTTGAATGCTAAAGCCATTGTCACTGTGAAGCCTCCTTTAATTAGTGATTTCAGCCTCAATCGAGGGCGTGATGATATTACTGATGTTTTTGGTTATACCCTCCTTTTGGAGTTTGTTAGTGCTGAGACTGATACAAAGACTGGATTGGAGAAGCCAACAATCAAAGGATACGCGCACTATATGCACACAAAAGATGGAAACGGGATGTTGAAATATGAGGGTGATATAGTAATTCCGCCATCATTTGGAGAAATTGGTGCTGTGATTGTTGAAAATGAGCACCACAAAGAGATGCACCTTGCTGAAATCGTCCTTGATGGTTTATCTTATGGCGCTGTTCGCTTCACTTGTAACTCTTGGGTGCACTCCAAATTCGACAATCCTGCTAATAGGGTTTTCTTCACTAACAAGTCATACTTGCCTTCGGAAACACCAAGTGGATTGAGGCGACTACGTGAGAGAGAGATGGAAATTATTCGAGGGGATGGACAAGGAGAACGGAAATCCTTTGAAAGAATTTATGATTATGACACTTACAATGATCTTGGAAATCCTGATGACCCTGAAATGGCACGACCTGTTTTGGGTGGTAAAGATTTTCCTTATCCAAGACGTTGCAGGACTGGACGTCCTCGTACCGAGACAGATCCATACTCAGAGACAAGAAGTGGGAGTGTATATGTACCAAGAGATGAACAATTTTCAGAGCTCAAGGGAGGAACATTTGGGTTCAAGACAATCTACTCAGTGTTGCATACTGTGGTGCCATTACTAGAGTCAGTGGTGACTGACCCTAATCTTGGATTTCCATACTTCACTGCCATAGACTCACTCTTCAATGAAGGCCTTCATGTACCTGGACTCAAAGACCACAGCTCTCTTGGGGCTGTTTTGCCTAGGCTCCTTAAAGCTGTCTCTGATCTTCAAGCTGATGTTCTTCGTTTCGAGACCCCCATGCTTTTTGAACGGGATAGGTTTTCTTGGTTTAGAGATGAGGAGTTTGCCCGTCAAGCTCTTGCTGGTGTCAATCCTTGTGTCATCAAGTTGGTCACACATGAGGACTGGCCATTGAAGAGTAAACTGGATCCCAAGATATATGGTCCACCAGAATCAGGAATCACAAAAGAGCTAGTAGAGAAAGAGATGAGAGAATGTGTAAGTGTTGAAGAGGCATTAAACCAAAAGAGGCTGTTTATAATAGACTATCATGATACATTTTTGCCATATGTAAACAAAGTTAGAGAGCTCAAGGGAACTACTCTTTATGGATCAAGAACCTTGTTCTTCCTCACAGATGATAAAACTCTAAGACCTATTGCCATTGAGCTAACTCGACCTCCATCTGGAGATAAGCCTCAATGGAAGCAAGTATTTACACCTGGTTGGAACTCCACTTCTCGTTGGCTTTGGAAACTTGCTAAGGCCCATGTTCTTGCTCATGACACTGGCTACCACCAACTTATCAGCCACTGGCTTAGAACGCATTGCTGCACAGAGCCATACATAATAGCAGCAAACAGGCAAATGAGTGCAATGCATCCAATCTATAGGTTGTTGCATCCTCATTTCCGGTACACCATGGAGATCAATTCCCTTGCTCGAGTATTGTTGATCAATGCTGGTGGAATCATCGAGAGCGCCTTCTCGCCTGGCAAGTACTCCATTGAAATCAGTTCTGTCATCTATGGCCAAAATTGGCGCTTCGATCATGAAGCTTTACCAGCTGACCTTATTAGCAGGGGAATGGCCGTTGAAGATGCATCAGAACCCTACGGGGTAAAGCTAACAATAGAGGACTACCCATACGCGAATGATGGGCTAGCCCTCTGGGATATAATCAAGCAATGGGTGACGGATTATGTCAGCCATTACTACCCGGAACAAAAGCTGATTGAGTCGGATCAAGAGCTCCAAGCATGGTGGCTAGAGGTACGAACAGTAGGGCACGGGGACAAGAAAGACGAACCATGGTGGCCGGAACTCAAGACCACCCAAGACCTTGTCCAAATCTTGACAACCATAATGTGGATAACTTCAGGGCACCATGCTGCTGTCAATTTCGGACAGTATGGTTTCGGAGGGTACTTCCCAAACAGGCCTACAATCGCGAGGACTAAGATGCCTACGGAAGATCCCACGGATGATGAGTGGAAATTGTTCATGGAAAAGCCTGAAGTTGTGCTCCTTAGATGCTTCCCTTCTCAACTTCAGGCTACAAAAGTGATGGCTATACTAGATGTGCTTTCCAATCATTCTCCGGAGGAGGAGTACTTGGGTGAAATTCCGGAGCCCTTTTGGGAAGATGACCCGTTTATAAAGGCAGCTTTCGAGAAGCTTAATGGAAGATTAAAGGAATTGGAAGGAATCATTGATGAGAGGAACGCCACTAAGGAGTTCAAGAACAGGCATGGGGCTGGTATTGTGCCTTATGAGCTTTTGAAGCCTTACTCTGAACCTGGGGTTACTTCTAAGGGAGTTCCTAACAGCATCTCTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48244.p1 GENE.S_Transcript_48244~~S_Transcript_48244.p1 ORF type:complete len:912 (+),score=172.17,Lipoxygenase|PF00305.15|0,PLAT|PF01477.19|1.2e-05 S_Transcript_48244:264-2999(+)
MLPTTTSNIPKNPSPFTLLPKAFLVDQNVQLYNTARAKKSLRSNARRKNAGLSHKTCRRAQNGGVKVAASVAATDSEKALNAKAIVTVKPPLISDFSLNRGRDDITDVFGYTLLLEFVSAETDTKTGLEKPTIKGYAHYMHTKDGNGMLKYEGDIVIPPSFGEIGAVIVENEHHKEMHLAEIVLDGLSYGAVRFTCNSWVHSKFDNPANRVFFTNKSYLPSETPSGLRRLREREMEIIRGDGQGERKSFERIYDYDTYNDLGNPDDPEMARPVLGGKDFPYPRRCRTGRPRTETDPYSETRSGSVYVPRDEQFSELKGGTFGFKTIYSVLHTVVPLLESVVTDPNLGFPYFTAIDSLFNEGLHVPGLKDHSSLGAVLPRLLKAVSDLQADVLRFETPMLFERDRFSWFRDEEFARQALAGVNPCVIKLVTHEDWPLKSKLDPKIYGPPESGITKELVEKEMRECVSVEEALNQKRLFIIDYHDTFLPYVNKVRELKGTTLYGSRTLFFLTDDKTLRPIAIELTRPPSGDKPQWKQVFTPGWNSTSRWLWKLAKAHVLAHDTGYHQLISHWLRTHCCTEPYIIAANRQMSAMHPIYRLLHPHFRYTMEINSLARVLLINAGGIIESAFSPGKYSIEISSVIYGQNWRFDHEALPADLISRGMAVEDASEPYGVKLTIEDYPYANDGLALWDIIKQWVTDYVSHYYPEQKLIESDQELQAWWLEVRTVGHGDKKDEPWWPELKTTQDLVQILTTIMWITSGHHAAVNFGQYGFGGYFPNRPTIARTKMPTEDPTDDEWKLFMEKPEVVLLRCFPSQLQATKVMAILDVLSNHSPEEEYLGEIPEPFWEDDPFIKAAFEKLNGRLKELEGIIDERNATKEFKNRHGAGIVPYELLKPYSEPGVTSKGVPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST