Transcript Information: S_Transcript_48270.p1


Annotated TAIR IDAT5G27260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9603943-9604930 | Forward length=303
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.439618441391
Replicate 210.274015435738
Replicate 311.836382859624
Condition 2: 8 Hour
Replicate 19.4213664684647
Replicate 28.8819578181601
Replicate 37.4446393127845
Condition 3: 24 Hour
Replicate 19.520456685453
Replicate 29.4714436438467
Replicate 311.3687424035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48270.p1 GENE.S_Transcript_48270~~S_Transcript_48270.p1 ORF type:complete len:335 (+),score=75.33 S_Transcript_48270:783-1787(+)
ATGTGGAATCCTATTAGGATGGAAGCTAGTAGCCATCAAAGTGGGCGGGGGAAAAACAAGCGGTATTGGAAAAAGGATGAGGAAGAGGTTCTACTCGATACTTTGGAGGAGATAAGTAAGGATCCTACATGGAAAGGGGAAGGAGGTTTCAAGAATGGGTTCATGGTCCATTTAGCGAATGTGTTAAATGAAAAGTTCCCTGGTGCTGGTCTTAAGGCAGTGCCTCATATTGATTCTAAGCTAAAGTGGTTTAAAGACAAGCACAATGTGATTCATGAGATGCTGAAACTTCCCGGCTTCAAATGGTGTGACAAAACCAAGACTGTGAAATCTGATAAACAAGTTTTTGACGATTTTGTCAAGAAACACCCCAAAGCAGCCGGATTATGGAATACCCAGTTCCCCTTCCTGGATAAGTTGGATAGTATCTATGGTATTGATCGAGCTAACGGTCAAACATGTGAGATGGTGGAAGATTCTGTGGAGAACTGTGAGCAGGATGTTGGCGAGTTAAACCTTGATCTTGAGGGAGAGGATAACACTTTAGACAACGATTCAACGAATCATGTTCCATTGCATATCTCACCTCCTACCAAGAAAGCAAGGAAAGAGAGTGCTCCTAAAAGCAAGGAGGATAAGGGAATCCTAGAGGGACTTTCAGATGCAGACTTGACAGTTGTGAATAATATAACTTCTGAATTTGGGGGTTTCTTGAAAGATGTCAATGCTCATCTGGCATCAATTGCTACTGCTATGACTGCTTGTCAACAACATGAGCAAGAAATCGTGCTTCGTGAAAAGGAACTGGTTGAACAGAAAAGGAATTTGCTAAGTGAGATAGCAACTTTGCCGGGAATCACGGATATTCAAGCAATTAGAGCTGCAAAATTGTTGGCAGCAAATTCGAGCGATATGGAGATCTATTATTCTAGCCCGTCGATTGAGTGGAAGAAGAAGTTCATAGTAGATCTTTTAGGCCTGGGCATTTCTTCTGGGGGTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48270.p1 GENE.S_Transcript_48270~~S_Transcript_48270.p1 ORF type:complete len:335 (+),score=75.33 S_Transcript_48270:783-1787(+)
MWNPIRMEASSHQSGRGKNKRYWKKDEEEVLLDTLEEISKDPTWKGEGGFKNGFMVHLANVLNEKFPGAGLKAVPHIDSKLKWFKDKHNVIHEMLKLPGFKWCDKTKTVKSDKQVFDDFVKKHPKAAGLWNTQFPFLDKLDSIYGIDRANGQTCEMVEDSVENCEQDVGELNLDLEGEDNTLDNDSTNHVPLHISPPTKKARKESAPKSKEDKGILEGLSDADLTVVNNITSEFGGFLKDVNAHLASIATAMTACQQHEQEIVLREKELVEQKRNLLSEIATLPGITDIQAIRAAKLLAANSSDMEIYYSSPSIEWKKKFIVDLLGLGISSGGD*

Click here to download the sequence:
Link to NCBI Protein BLAST