Transcript Information: S_Transcript_48273.p1


Annotated TAIR IDAT5G27260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9603943-9604930 | Forward length=303
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8770812146141
Replicate 21.3913470892127
Replicate 31.2461308164595
Condition 2: 8 Hour
Replicate 12.1133269683645
Replicate 21.8139336734914
Replicate 34.0327279252667
Condition 3: 24 Hour
Replicate 14.5264172998528
Replicate 23.1647664813818
Replicate 33.0675459411628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48273.p1 GENE.S_Transcript_48273~~S_Transcript_48273.p1 ORF type:internal len:222 (+),score=41.00,Myb_DNA-bind_3|PF12776.3|7.9e-06 S_Transcript_48273:3-665(+)
CTCTTCAGACCAACCGTCGTTTTCCGGTCGCCTGAGTTCTCTCTCCGGCAATCCTCGCCGGCTGTAACTTCTGATCTTGTCTCTCACTGTATCGAATTGAACATCTCTGAGCTTCTTCACGCCACAAGGATGGAAGCTAGTAGCCATCAAAGTGGGCGGGGGAAAAACAAGCGGTATTGGAAAAAGGATGAGGAAGAGGTTCTACTCGATACTTTGGAGGAGATAAGTAAGGATCCTACATGGAAAGGGGAAGGAGGTTTCAAGAATGGGTTCATGGTCCATTTAGCGAATGTGTTAAATGAAAAGTTCCCTGGTGCTGGTCTTAAGGCAGTGCCTCATATTGATTCTAAGCTAAAGTGGTTTAAAGACAAGCACAATGTGATTCATGAGATGCTGAAACTTCCCGGCTTCAAATGGTGTGACAAAACCAAGACTGTGAAATCTGATAAACAAGTTTTTGACGATTTTGTCAAGAAACACCCCAAAGCAGCCGGATTATGGAATACCCAGTTCCCCTTCCTGGATAAGTTGGATAGTATCTATGGTATTGATCGAGCTAACGGTCAAACATGTGAGATGGTGGAAGATTCTGTGGAGAACTGTGAGCAGGATGTTGGTGAGTTAAACCTTGATCTTCAAGGAGAGGATAACACTTTAGACAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48273.p1 GENE.S_Transcript_48273~~S_Transcript_48273.p1 ORF type:internal len:222 (+),score=41.00,Myb_DNA-bind_3|PF12776.3|7.9e-06 S_Transcript_48273:3-665(+)
LFRPTVVFRSPEFSLRQSSPAVTSDLVSHCIELNISELLHATRMEASSHQSGRGKNKRYWKKDEEEVLLDTLEEISKDPTWKGEGGFKNGFMVHLANVLNEKFPGAGLKAVPHIDSKLKWFKDKHNVIHEMLKLPGFKWCDKTKTVKSDKQVFDDFVKKHPKAAGLWNTQFPFLDKLDSIYGIDRANGQTCEMVEDSVENCEQDVGELNLDLQGEDNTLDN

Click here to download the sequence:
Link to NCBI Protein BLAST