Transcript Information: S_Transcript_48292.p1


Annotated TAIR IDAT4G00585.1
Annotated Gene Nameunknown protein; Has 47 Blast hits to 47 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:251157-252284 | Reverse length=88
E-Value4.4E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1195.48459089114
Replicate 2136.38815362827
Replicate 3145.52995382332
Condition 2: 8 Hour
Replicate 1141.52304483188
Replicate 2143.99335306297
Replicate 3139.1343507307
Condition 3: 24 Hour
Replicate 1144.37482088784
Replicate 2141.75183967752
Replicate 3141.93132260697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48292.p1 GENE.S_Transcript_48292~~S_Transcript_48292.p1 ORF type:5prime_partial len:110 (-),score=10.12 S_Transcript_48292:286-615(-)
CTACTCCCTCCCTTCGCCCTAACGTCTCCCCCTTCCACAAGTCCGTGCTCACCTCCCCCCACTTCTCTATACCTGAGAGAAATGGGGGGAGGTGAGCACGGACATGTGGAAGGAGGAGACTTTAGGGCAAAAGTATGGAGTATGTCTGGTGGGCCCTACTGTCGGCCAAAACACTGGCGTCGCAACACCGCCTTTGCTCTTTTCGGTGTCTTCCTTGTTTGTGTTCCCATTGCCATGAAATCAGCCCAGCTCGAGCAACGACCTCATGAGCCTGTCCGACCCATTCCTTCTCAGATGTGGTGCAAGAACTTTGGAAACAAAGAATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48292.p1 GENE.S_Transcript_48292~~S_Transcript_48292.p1 ORF type:5prime_partial len:110 (-),score=10.12 S_Transcript_48292:286-615(-)
LLPPFALTSPPSTSPCSPPPTSLYLREMGGGEHGHVEGGDFRAKVWSMSGGPYCRPKHWRRNTAFALFGVFLVCVPIAMKSAQLEQRPHEPVRPIPSQMWCKNFGNKEY*

Click here to download the sequence:
Link to NCBI Protein BLAST