Transcript Information: S_Transcript_482982.p1


Annotated TAIR IDAT1G57660.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21355567-21356364 | Forward length=164
E-Value2.1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.40857017699101
Replicate 30.45537619959508
Condition 2: 8 Hour
Replicate 10.13163821183415
Replicate 20
Replicate 30.13157930620359
Condition 3: 24 Hour
Replicate 10
Replicate 20.27980014291787
Replicate 30.15569163213035


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_482982.p1 GENE.S_Transcript_482982~~S_Transcript_482982.p1 ORF type:5prime_partial len:162 (+),score=3.03,Ribosomal_L21e|PF01157.14|2.7e-39 S_Transcript_482982:1-486(+)
GGCTTGCGTTCTCGCACCCGCGACAAGTTCTCAAAGGGCTATCGTCAGAATGGTGTCGTGCCCACCACAGACATCCTGCGGACGTTCAAAGTGGGCGACTATGTGGACATCAAGGTCAACTCCGCAGTGCATGGCGGTATGCCGCATAAATTCTACCATGGTCGCACAGGCGTGGTCTGGAACATCACCAAGCGCGCAGTGGGCGTTGAGGTGAACAAGGAGGTCAATGGGCGCATCATCAAGAAGCGAATCCATGTGCGCACAGAGCATGTGGTTCCATCGCGCTGCCGCGAGGATTTTTTGAAGCGCAGGGCGCTGCACGAGAGCCTCAAGAAGGACGCAAAGGCCAAGGGCGAGAAGCTCGGCCGGTATGACCTCCGGCGGCTGCCCAAGCAGCCCCGCGACGGCTTCACCATTGAGAACGTCAAGCTGGAGACGGTGGCACCCATCCCCTACGACGTGCTCAAGGAGGGCGTCGTGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_482982.p1 GENE.S_Transcript_482982~~S_Transcript_482982.p1 ORF type:5prime_partial len:162 (+),score=3.03,Ribosomal_L21e|PF01157.14|2.7e-39 S_Transcript_482982:1-486(+)
GLRSRTRDKFSKGYRQNGVVPTTDILRTFKVGDYVDIKVNSAVHGGMPHKFYHGRTGVVWNITKRAVGVEVNKEVNGRIIKKRIHVRTEHVVPSRCREDFLKRRALHESLKKDAKAKGEKLGRYDLRRLPKQPRDGFTIENVKLETVAPIPYDVLKEGVVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST