Transcript Information: S_Transcript_48304.p1


Annotated TAIR IDAT2G39720.1
Annotated Gene NameRING-H2 finger C2A
Annotated Gene Symbol(s)RHC2A
Annotation TypeHomolog
Chromosome Positionchr2:16567506-16568711 | Reverse length=401
E-Value5E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2724245335442
Replicate 26.8342647787588
Replicate 36.3338689580042
Condition 2: 8 Hour
Replicate 14.0927516770255
Replicate 26.6286958932523
Replicate 34.3062318393902
Condition 3: 24 Hour
Replicate 18.3849047741675
Replicate 28.5466225473095
Replicate 36.7938166747787


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48304.p1 GENE.S_Transcript_48304~~S_Transcript_48304.p1 ORF type:internal len:297 (-),score=53.24,DUF1117|PF06547.8|1.1e-38,zf-RING_2|PF13639.2|2.2e-12,zf-rbx1|PF12678.3|8e-07,zf-RING_11|PF17123.1|3.6e-07,zf-RING_11|PF17123.1|7.7e+03,zf-C3HC4_2|PF13923.2|1e-05,zf-C3HC4|PF00097.21|1.8e-05 S_Transcript_48304:3-890(-)
GAGTTGTATTACGATGACGGTGTGGGTTCGGGGTTAAGGCCTTTGCCGGCGAGCGTTTCGGAGTTTCTATTAGGGTCTGGGTTTGACAGGTTGTTGGATCAGTTGGCCCAGATTGAGATTAATGGGCTGGGCCGAGCGGAGCAGCCCCCTGCCTCGAAGGCGGCGATTGAATCTATGCCGACAATCGAGATTGCGGAGAGTCACGTGATGACGGAGTCTCATTGTGCTGTTTGTAAGGAAGCTTTTGAGCTAGGGGCCGAAGCTAGGGAGATGCCATGTAAGCATATTTATCATCAAGATTGTATCTTGCCTTGGTTGTCCTTGCGTAATTCCTGCCCTGTTTGTCGTCACGAGTTGCCTCCTTCTGGGGGTGCTGGTGATGACTCATCACCACCTGAGAATTTTAATGAGAATAATAGTAGTAGGAGGCATCATCATGTGGTGGAGAATAGTGAGGAGGAGGCGGTGGGGTTGACGATATGGAGGTTGCCGGGAGGAGGGTTTGCGGTGGGCCGTTTTTCGGGAGGGAGGAGAGGCGGCGACGGTGGTGGCAGAGAAAGAGAGTTGCCTGTTGTTTATACAGAAATGGATGGTGGGTTTAATCAAGGGGGCTTGCCTAGGAGGATTTCTTGGGGTTCTAGAGGTGCTAGGTCTAGGGAAACTACCGGCATTCGTCGTGCTCTCCGAAACTTGTTCGCTTGTTTTGGGGGTATGCATTCCTCTGATACGACTTCCTCGAGCTCTGATCATTCCAGGATTAATAATAATAATAATAATAGTCATAATAATCATGATAACAATAATCATAATAATAACGATGATGATAATAATAATAACCATAATAATAACACCAACAACAACAACAACAATAATAATAATAATAATAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48304.p1 GENE.S_Transcript_48304~~S_Transcript_48304.p1 ORF type:internal len:297 (-),score=53.24,DUF1117|PF06547.8|1.1e-38,zf-RING_2|PF13639.2|2.2e-12,zf-rbx1|PF12678.3|8e-07,zf-RING_11|PF17123.1|3.6e-07,zf-RING_11|PF17123.1|7.7e+03,zf-C3HC4_2|PF13923.2|1e-05,zf-C3HC4|PF00097.21|1.8e-05 S_Transcript_48304:3-890(-)
ELYYDDGVGSGLRPLPASVSEFLLGSGFDRLLDQLAQIEINGLGRAEQPPASKAAIESMPTIEIAESHVMTESHCAVCKEAFELGAEAREMPCKHIYHQDCILPWLSLRNSCPVCRHELPPSGGAGDDSSPPENFNENNSSRRHHHVVENSEEEAVGLTIWRLPGGGFAVGRFSGGRRGGDGGGRERELPVVYTEMDGGFNQGGLPRRISWGSRGARSRETTGIRRALRNLFACFGGMHSSDTTSSSSDHSRINNNNNNSHNNHDNNNHNNNDDDNNNNHNNNTNNNNNNNNNNNN

Click here to download the sequence:
Link to NCBI Protein BLAST