Transcript Information: S_Transcript_48306.p1


Annotated TAIR IDAT3G16500.1
Annotated Gene Namephytochrome-associated protein 1
Annotated Gene Symbol(s)PAP1, IAA26
Annotation TypeOrtholog
Chromosome Positionchr3:5612801-5614208 | Reverse length=269
E-Value9.9E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1103.06087458942
Replicate 282.200697935893
Replicate 358.24021921137
Condition 2: 8 Hour
Replicate 161.081588886193
Replicate 244.805669159342
Replicate 361.408536036511
Condition 3: 24 Hour
Replicate 151.616857666141
Replicate 246.018210209038
Replicate 349.046745629893


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48306.p1 GENE.S_Transcript_48306~~S_Transcript_48306.p1 ORF type:complete len:361 (+),score=94.66,AUX_IAA|PF02309.12|1.2e-72 S_Transcript_48306:903-1985(+)
ATGAGTGAGAGTTGTCCAAAATTGCTGGATTTAATACCAAAAAATAAGAGAGAATGGGTGTTGAATAATGGTGAAGAAAAGGGAAAAGGGTCTTGTTCTTCTGGTTCTTGTGAGGAGAGCAAAACACTTGAGCTTAGGCTTGGTCTTCCTGGTGATGAGGGTTGGTCAGCCAAACACAACCTCAAGAACAACCCCTTTAAAGAAAGAGATGAATCACTTTTCTCTCTAAGATACTTCTCTGACCATAAACAGAATAGCCATCAACAACAACCGGCATGGCCTTGTTCAGGTTACCAAGCACAAACACAACAGCAACAGCAACAATTACAAAAACAACAACAACAAAACACAAATTCTGCATTTCTCCACCACCCTCATAGTCATCAGTACCAAACAGGTCCTAACAAGGGGTTGGGTGTTATGGGTAAAGAATCATCACAGCCCTGTTGCACTAGAATAGTAGACTTGCAGAATGCAGAAAAGAAGGGAGCATTTCCGCCAGCTTCTGCCAATACAGCTGTGCCCAACACTTCTCAAAAAAGAGCTGCTCCTGCTCCAGTTGTGGGATGGCCTCCAGTTAGGTCCTTCAGAAAGAACCTTGCTAGTACTAGTTCAGCAAAGCCGGTCTCTGAACCGCAGAGTGCGATCCCAAGCAAGCCTGTGAATGAGAAGCCAAGTGGTGAAAGCTCCCACAAGGGTTTGTTTGTGAAGATCAACATGGATGGTGTCCCTATTGGAAGGAAAGTGGACCTGAGTGCATATAACAGCTATGGCAAGCTCTCTACTGCTGTTGATGAGCTCTTTAGAGGGCTTCTTGCAGCTCAAAGGGATTCTTCTGCTGATGGGATCGATAACAAACAAGAAGAGCAGAAACCAATTACAGGATTATTGGACGGAAGTGGGGAATATACTCTGGTTTATGAAGATAACGAAGGAGACAGGATGCTTGTTGGGGATGTCCCATGGGACATGTTTGTGTCCACTGTCAAGAGACTGCGGGTGTTGAAGAGTTCTGACCTACCCACTTTAAGCCTAGGTGGCAGTAAGGAAGGCAAGGCGCTGGCTGAGAGTGCATCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48306.p1 GENE.S_Transcript_48306~~S_Transcript_48306.p1 ORF type:complete len:361 (+),score=94.66,AUX_IAA|PF02309.12|1.2e-72 S_Transcript_48306:903-1985(+)
MSESCPKLLDLIPKNKREWVLNNGEEKGKGSCSSGSCEESKTLELRLGLPGDEGWSAKHNLKNNPFKERDESLFSLRYFSDHKQNSHQQQPAWPCSGYQAQTQQQQQQLQKQQQQNTNSAFLHHPHSHQYQTGPNKGLGVMGKESSQPCCTRIVDLQNAEKKGAFPPASANTAVPNTSQKRAAPAPVVGWPPVRSFRKNLASTSSAKPVSEPQSAIPSKPVNEKPSGESSHKGLFVKINMDGVPIGRKVDLSAYNSYGKLSTAVDELFRGLLAAQRDSSADGIDNKQEEQKPITGLLDGSGEYTLVYEDNEGDRMLVGDVPWDMFVSTVKRLRVLKSSDLPTLSLGGSKEGKALAESASK*

Click here to download the sequence:
Link to NCBI Protein BLAST