Transcript Information: S_Transcript_48319.p1


Annotated TAIR IDAT3G61800.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (InterPro:IPR008942); Has 308 Blast hits to 279 proteins in 95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi - 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22874723-22876846 | Reverse length=664
E-Value5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3027007985022
Replicate 25.4166130051384
Replicate 37.5648348606386
Condition 2: 8 Hour
Replicate 14.0224538622137
Replicate 25.8943792823232
Replicate 34.8503126286784
Condition 3: 24 Hour
Replicate 110.072191789076
Replicate 26.9891394980951
Replicate 38.6087217430636


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48319.p1 GENE.S_Transcript_48319~~S_Transcript_48319.p1 ORF type:3prime_partial len:334 (+),score=85.42 S_Transcript_48319:387-1385(+)
ATGCGATCAAAGCTGTTTAGAACCCTAATAACCGATAATCTGGATCAATTGTTGACCCTAGCTGTTGGATTTCGAGGGAATCAGCCCTTACCTGGTCCTCCTTCTGTTGCATCTGTCTTACGAACAAAGGCGATTGAGTATTTGGAGAAATGTTGTGTTTCATTTGGGATTCACTATAGGCAGCTTAGATTAGGGTACGATTATCTTAAGAACAATCTTAAGCTTCAGTTTCCAGATATACAAGGGACTGTGTCTCGAATTCTGCGAGAGAGGAGGGAGAGGGACTTGAGGACACAGGAGATTTTGAGGAATAAATTCGAGTCGTTGAGGGAGAGTCTCAGTTCGATTAGGGAGGAGATAAATTCGACGATTGATGAAATTGCAGAGTGCTTAGAGATTGCTAAAGCGGATGATGAGGATGGGTTGGGAATGGAGCCATTGGATGATGAGGAGGGGGAGGAAGATTTTGGTGTGATTCGTAACCCTGAGTTAAGACAGATTAGGATGAGTTCATTGATGGAAACCGAGAAGGTTCATGAGAACAACGAGAATAGAGTCTTGTTTGATGTGTTGAGGGAGCTTTACAAGTTGTTGGTGACCAAGCATTTGGTTTCGGTACAGCAGTGGATATCGGTTCTTATTAGGGTTGAAGTGAATGACACTAGGTTTAGGGACTCAACTCTCAAAGAGTTTATTGATTTTAAGAACCGGATTTTTGCTGCAAAGAAGAAATGTGAGGAGTCAGGGTGTGCCCTTCCCAACACCAAGGGTAGCGATGAAGATGATATTTGGGTGGAGGGTGAAGTTGGGTTTGTGAATAGTAAGGATTTGTCAGCTGTATCGAATTCGACTTCAACTGCTAATGTGGTGCTGACTAAAGATGCTCCTGAAGGCAGCAAAAGAAGGGGAAATAACAAGGAGATGCTGACTAAAGATGCTCCTGAAGGCAGCAAAAGAAGGGGAAATAACAAGGAGATGCTGACTAAAGATGCTCCTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48319.p1 GENE.S_Transcript_48319~~S_Transcript_48319.p1 ORF type:3prime_partial len:334 (+),score=85.42 S_Transcript_48319:387-1385(+)
MRSKLFRTLITDNLDQLLTLAVGFRGNQPLPGPPSVASVLRTKAIEYLEKCCVSFGIHYRQLRLGYDYLKNNLKLQFPDIQGTVSRILRERRERDLRTQEILRNKFESLRESLSSIREEINSTIDEIAECLEIAKADDEDGLGMEPLDDEEGEEDFGVIRNPELRQIRMSSLMETEKVHENNENRVLFDVLRELYKLLVTKHLVSVQQWISVLIRVEVNDTRFRDSTLKEFIDFKNRIFAAKKKCEESGCALPNTKGSDEDDIWVEGEVGFVNSKDLSAVSNSTSTANVVLTKDAPEGSKRRGNNKEMLTKDAPEGSKRRGNNKEMLTKDAPE

Click here to download the sequence:
Link to NCBI Protein BLAST