Transcript Information: S_Transcript_48328.p1


Annotated TAIR IDAT4G27000.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)ATRBP45C
Annotation TypeOrtholog
Chromosome Positionchr4:13554983-13557763 | Reverse length=415
E-Value3.5E-173
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 188.138276440005
Replicate 278.435280963306
Replicate 378.333700246977
Condition 2: 8 Hour
Replicate 191.86321982765
Replicate 290.836217034067
Replicate 378.926246537363
Condition 3: 24 Hour
Replicate 174.526930993898
Replicate 267.426017392418
Replicate 379.861067835742


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48328.p1 GENE.S_Transcript_48328~~S_Transcript_48328.p1 ORF type:5prime_partial len:481 (+),score=93.21,RRM_1|PF00076.18|1.7e-11,RRM_1|PF00076.18|1.8e-13,RRM_1|PF00076.18|3.3e-18,RRM_6|PF14259.2|0.0028,RRM_6|PF14259.2|1.3e-06,RRM_6|PF14259.2|2.8e-11,RRM_5|PF13893.2|0.028,RRM_5|PF13893.2|0.0035,RRM_5|PF13893.2|5.9e-09 S_Transcript_48328:2-1444(+)
CCCTCGCGTTGTCGTTTATTCGGGATTAGGGATTCCCCTTCTCCTCTACCACCCACCCCCTTCCTTAGGGTTTCTCCTTCTCCACGTCCCCCAAATATCTCATCTCATCTCAACTATCATCAAACCCTAACCTTATCTCCAACCATGATGCAACAGTCTGGAGGAGTGGTCCCGCCACCCATGCCACCACCCCAACAAGTGGACTCTACTCAGCAGCCGGCCCCACAGTACGGCCAACCCCCACCACCCGCTGGAGCCGCTCAGCCTCCACCTCAGCAGCCCTGGATGATGATGGCGGGCCCACCTCAACAGCCTCCCTACCAGGCTGGCCCACCACCACCACAGATGTGGCAGCCCCCACACGGTGCCGGCCCCGCCCCTCCACCTCAGCAGCAACAGCAGCAGCAGCCCTACCAGATGTCGGGTGGCCCCGCTGCCGTCACGAGCCCCGATGAGATTCGGTCGCTCTGGATTGGGGACTTGCAGTACTGGATGGATGAGAACTATCTCTATGGTTGCTTCGCCGCCGCCGGCGAGGTTGTGGCAGTGAAAGTTATCCGTAATAAGCAGACCAATCTATCTGAAGGTTATGGGTTTATAGAATTTGCAAACCGTGCTGCAGCAGAACGTACTCTGAATACATACAATGGTGCATTGATGCCACAAACCGAGCAGGCTTTCAGATTGAATTGGGCAACTCTTAGTGCGGGTCAGAGGCGGCAAGATGACAGTCCAGATTATACAGTTTTTGTTGGCGACCTAGCAGCTGACGTTTCTGATGTCATGCTCCAGGAAGCATTTCGAGCCCACTATACATCTGTTAAGGGAGCAAAAGTCATAACTGATCATACTACAGGACGTTCTAAAGGGTATGGGTTTGTGAGGTTTGGGGACGAGGGCGAACAGCAACGTGCCATGACCGAAATGAATGGGGTTGTCTTGTCGACTAGGCCCATGAGGATTGGTCCAGCTGCCAACAAGAAGCCGGCAACTGTTCAGCAAAAAGCTTCTTATCCGACTTCGCAGGGAAATCCAGGCGAAAATGATCCCAATAACACAACTATATTTGTTGGTGGTCTGGACCCCAGTGTCTCAGATGATCAATTGAGACAGGTCTTCAGCCCATATGGTGAGTTGGTTCATGTAAAAATACCAGTTGGCAAGGGTTGTGGATTTGTGCAGTTTGCTAATAGAGCTTGTGCTGAGCAAGCACTGTCAGCATTGAATGGAGCCCAGATAGGATCACAGAATGTGCGGCTTTCTTGGGGTCGTAGTCCTTCAGCAAAACAGCAGGCTCAGCCAGGTCAAGCTCAGTGGAATGGTGCATATTATGGATATGCTCAGGGATACGATGCCTATGGTTATGGAGCAGCTCCCCAGGACCCTAACATGTATTACGCAAATTATGCGGGATACGGAAATTACCAACAACCACAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48328.p1 GENE.S_Transcript_48328~~S_Transcript_48328.p1 ORF type:5prime_partial len:481 (+),score=93.21,RRM_1|PF00076.18|1.7e-11,RRM_1|PF00076.18|1.8e-13,RRM_1|PF00076.18|3.3e-18,RRM_6|PF14259.2|0.0028,RRM_6|PF14259.2|1.3e-06,RRM_6|PF14259.2|2.8e-11,RRM_5|PF13893.2|0.028,RRM_5|PF13893.2|0.0035,RRM_5|PF13893.2|5.9e-09 S_Transcript_48328:2-1444(+)
PSRCRLFGIRDSPSPLPPTPFLRVSPSPRPPNISSHLNYHQTLTLSPTMMQQSGGVVPPPMPPPQQVDSTQQPAPQYGQPPPPAGAAQPPPQQPWMMMAGPPQQPPYQAGPPPPQMWQPPHGAGPAPPPQQQQQQQPYQMSGGPAAVTSPDEIRSLWIGDLQYWMDENYLYGCFAAAGEVVAVKVIRNKQTNLSEGYGFIEFANRAAAERTLNTYNGALMPQTEQAFRLNWATLSAGQRRQDDSPDYTVFVGDLAADVSDVMLQEAFRAHYTSVKGAKVITDHTTGRSKGYGFVRFGDEGEQQRAMTEMNGVVLSTRPMRIGPAANKKPATVQQKASYPTSQGNPGENDPNNTTIFVGGLDPSVSDDQLRQVFSPYGELVHVKIPVGKGCGFVQFANRACAEQALSALNGAQIGSQNVRLSWGRSPSAKQQAQPGQAQWNGAYYGYAQGYDAYGYGAAPQDPNMYYANYAGYGNYQQPQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST