Transcript Information: S_Transcript_483496.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43177435632299
Replicate 20.29286888793161
Replicate 30.51683183715105
Condition 2: 8 Hour
Replicate 10.72342769512398
Replicate 21.2868762491878
Replicate 31.3204507365918
Condition 3: 24 Hour
Replicate 10.38663510602821
Replicate 20.46798430983608
Replicate 30.48360852104205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_483496.p1 GENE.S_Transcript_483496~~S_Transcript_483496.p1 ORF type:complete len:678 (+),score=81.12,RVT_1|PF00078.23|1.9e-38,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|5.1e+03,zf-RVT|PF13966.2|5.2e+03,zf-RVT|PF13966.2|6.4e-14,zf-RVT|PF13966.2|1.6e+04 S_Transcript_483496:638-2671(+)
ATGCCTCAGAATCTTAATCACACCTTTATTGTCCTAATCCCGAAAAAGAAGAACCCCATCAAAATTACTGAGTTTAGACAAATTAGCCTTTGTAATGTAGCATACAAGTTGATATCTAAATTGCTGGCTAATCGGCTTAAGAGAATACTCCCTTGCATTGTCTCCCCTAATCAAAGTGTCTTTATCCCAGGCAGACTTATAACCAATAATATTCTAATGGCTTGTGAGACTTTTCACTTTATGAAGAACTCTAAGTCTAGAGAGGGGTTTGCAGCTTTGAAGTTAGACATGGCTAAGGCTTATGACCGGGTTGAATGGAACTTTTTGAGGAGTGTTTTATTAAAGATGGGATTTGATGAGAGTTGGGTGGGAAGTGTTATGGGTTGTGTCGCCTCGGTCTCTTTCTCAGTGCTTATTAATGGAAATCCGTCTAATACTTTCTTCCCTCATCGGGGGCTCCGACAAGGAGACCCGATTTCCCCTTATTTATTTATTTTGGTGGCTGAAGTGATGTCAGGCTTAATCCGGAAGGCCAATGAGAACGCAATACTGCGAGGTGTTCGTATTTGCAACAACGCTCCGACTGTATCACACTTGTTATTTGCTGATGATAGCCTCCTTTTCTTCAAAGCATCGACTGTTCAAGCAGAAGCAATAAAAAATATTTTGACGATATATGAAGGGGCCTTGGGCCAAAAGGTGAGCTTTGAGAAGTCACAGGTGTGGTTTAGTCCAGGAGTGGAGATGCAAAGGAGGGTTGCTATGATTGAGATGCTGGGGGTTGAGGAAGTCCAACAACATGAACGTTATCTTGGCCTTCCAACGGTCTTGGGTAGCTCGAAGAGAAGCATTAGTGGCCCGTTGAAGGAGCGTTTATGGAAGAAACTCAATGGGTGGAAAGGTTCTATGCTTTCCAAAGCAGGCAGGGAGGTTATGATCAAGTCGGTGGCCCAGTCCATTTCCACTTATGCTATGAGCGTCTTCAAATTCTCGGCCGCCTTTTGTAATGAAGCGAGAACTATGGTCTCAGTTTTTTGGGGGCAACGAAGAGAGGAAAGGAAAGTTCACTGGGTAGCCTGGAAAAAGTTATGCAAACCCAAAGTGCAAGGAGGGATGGGGTTCCGTGACTTTAAGATGTTTAATTGGGCTCTATTGGGAAAACAAGCTTGGAGATTGGCGAAAGGGGAGGGTGGACTGCTGGAACAACTTTACCGAGCAAGATACTACCCCAATGACGATTTTATGGCGTCTAATCTTGGTCATAACCCAAGCTTTGCATGGCGGGGGATTTGGGAGGCAAAATGGGTGATTAGGAAAAGGATGAGGTGGAGGATTGGTGATGGTGCCAGTGTTAAGGTCTGGGGAGATGCCTGGTTACGGAGTGAAGGGGCTGGAAGGGTGGTGTCGCCTGTAGGGGGTCACGACCCGGATTTGCGAGTGGCTGCTCTGATCGACCCTGAACGTGGAGCGTGGCGAAATGAGGTGATTAACGAAATTTTTATTCCTCTAGAAGCTGACCAAATCAGGAGTATTCCTTTGAGTTCTCGGTTACTAAGAGATAGCATGTACTGGGGTTGGGACAAAAGAGGGGAATTTACTGTTCGGAGTGCATACCACGGAATTCATACAGCCGTTAGCCATGAAGGGGAAGCATCTTCTTCAACTGTTAATCTGAGGTTGTGGAAAAAGGTCTGGGAGTTGGATGTCCTTCCTCGTGTGAAGATGTTCATTTGGCGACTGTGCAATAACGCCCTTCCTACTCGGGTAGCGCTGCATCGAAAAATTGAAGCCATCCCAATACTCTGCGAGATCTGTAAGGAGGAGCCCGAGGATGAGCTTCACGCACTTCGCTTCTACCCGAGAGCAATGGATGTCTGGCGCTGCTGTGATCTCGGTCTTCTTGCTCCTGCCTTGGGTCGTTCAGCGAAGGAATGGGTGGAACTTTTGGGTGAGAGGCTTACTTCGGCTGAGTTCACTTGGTTTTGCTGGATCGCATGGGTGATTTGGAGTGGGAGAGATCGCTGGCTGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_483496.p1 GENE.S_Transcript_483496~~S_Transcript_483496.p1 ORF type:complete len:678 (+),score=81.12,RVT_1|PF00078.23|1.9e-38,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|5.1e+03,zf-RVT|PF13966.2|5.2e+03,zf-RVT|PF13966.2|6.4e-14,zf-RVT|PF13966.2|1.6e+04 S_Transcript_483496:638-2671(+)
MPQNLNHTFIVLIPKKKNPIKITEFRQISLCNVAYKLISKLLANRLKRILPCIVSPNQSVFIPGRLITNNILMACETFHFMKNSKSREGFAALKLDMAKAYDRVEWNFLRSVLLKMGFDESWVGSVMGCVASVSFSVLINGNPSNTFFPHRGLRQGDPISPYLFILVAEVMSGLIRKANENAILRGVRICNNAPTVSHLLFADDSLLFFKASTVQAEAIKNILTIYEGALGQKVSFEKSQVWFSPGVEMQRRVAMIEMLGVEEVQQHERYLGLPTVLGSSKRSISGPLKERLWKKLNGWKGSMLSKAGREVMIKSVAQSISTYAMSVFKFSAAFCNEARTMVSVFWGQRREERKVHWVAWKKLCKPKVQGGMGFRDFKMFNWALLGKQAWRLAKGEGGLLEQLYRARYYPNDDFMASNLGHNPSFAWRGIWEAKWVIRKRMRWRIGDGASVKVWGDAWLRSEGAGRVVSPVGGHDPDLRVAALIDPERGAWRNEVINEIFIPLEADQIRSIPLSSRLLRDSMYWGWDKRGEFTVRSAYHGIHTAVSHEGEASSSTVNLRLWKKVWELDVLPRVKMFIWRLCNNALPTRVALHRKIEAIPILCEICKEEPEDELHALRFYPRAMDVWRCCDLGLLAPALGRSAKEWVELLGERLTSAEFTWFCWIAWVIWSGRDRWLF*

Click here to download the sequence:
Link to NCBI Protein BLAST