Transcript Information: S_Transcript_48376.p1


Annotated TAIR IDAT1G55490.1
Annotated Gene Namechaperonin 60 beta
Annotated Gene Symbol(s)CPN60B, LEN1
Annotation TypeOrtholog
Chromosome Positionchr1:20715717-20718673 | Reverse length=600
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1195.89273396835
Replicate 2202.96312502333
Replicate 3244.6472997449
Condition 2: 8 Hour
Replicate 1180.5456027014
Replicate 2205.80626491636
Replicate 3207.61003466334
Condition 3: 24 Hour
Replicate 1131.82505473813
Replicate 2158.94538036328
Replicate 3166.91425432513


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48376.p1 GENE.S_Transcript_48376~~S_Transcript_48376.p1 ORF type:complete len:607 (+),score=166.58,Cpn60_TCP1|PF00118.20|7.1e-99 S_Transcript_48376:2638-4458(+)
ATGGCTTCAAGTTTCACAGCCATGTCTGGTGTAGGATCTTTGCTATCCACAGGAAGCCACTCATTTGACAAGAAAACTTTGGTCTTATCACACAAATTGTCTTCTTTGGATTGCATATCTTCTTGCTCTTTGAGAACCATTCCAAATGGTATAGTGCATAGGAAAAGATGTTCGCTTAAGGTTAAAGCTGCAACTAAAAAGTTGCACTTCAACAAGAATGGTTCTGCTATCAGGAAACTACAGGCAGGTGTTAATAAGCTTGCAGATTTGGTGGGTGTTACTCTTGGTCCAAAAGGAAGGAATGTTGTTTTGGAGAGCAAGTATGGTTCCCCAAAAATTGTTAATGACGGTGTGACTGTGGCCAAAGCGGTTGAGTTGGAAGATCCTGTGGAAAATATTGGAGCTAGACTTGTTCTTCAAGCTGCTTCCAAAACTAATGATTTAGCTGGTGATGGTACTACTACTTCTGTAGTCTTAGCTCAAGGGTTGATAGCCGAAGGCGTGAAGATTGTAATAGCTGGAGCAAATCCTATTCAAATTGCCAAGGGGATTGAGAACACTGCCAAAGCTTTGGTATCTGAGCTGAGGCTCATGTCCAAAGAGGTTGAAGACTCAGAACTTGCAGATGTGGCTGCTGTCAGTGCAGGCAATAACTACGAAATAGGAAACATGATTAGTGATGCCATGCAAAAAGTGGGCCGTAAGGGTGTGGTGACTCTTGAAGAAGGAACAGGCGCCGTGAGCACCTTGTATGTTGTTGAAGGAATGCAATTCGATCGTGGCTATATCTCCCCTTACTTTGTTACAGATAGTGATAAAATGATTGTTGAGTACGAAAATTGCAAGTTGCTCTTGGTTGACAAAAAGGTCACAAATGCGAGGGACCTGGTTGGTGTCCTGGAGGATGCAATTAAAAACAACTACCCGATCTTGGTAATTGCAGAAGACATTGAGCAGGAACCTCTTGCTACGCTTGTCGTGAACAAGCTTAGAGGGTCACTTAGGATAGCTGCAATGAAGGCTCCAGGATATGGAGATGATCGAAGGCGCCAATATCTTGATGATATTGCTATCCTTACTGGAGGAATTGTGGTCAGAGATGAGGTTGGTTTGTCGTTGGACAAAGTTGGCTCCGAGGTCCTTGGAACTGCTGCCAAAGTGGTGCTTAACAAAGAGACAGCCACCTTTGTTGGGGATGGAAGCACACAAGATGCTGTCGCTAAGAGAATTGTCCAGATTAAGAAGCAAGTGGAGGAGACGGACCAGGAGTATGAAAAGACAAAGCTCAATGAGAGGATTGCAAAACTCTCCAGTGGTGTTGCTGTAATCCAGGTCGGAGCACAGACAGAGACTGAGATGAAAGAAAAGAAATTGAGAGTGGAGGATGCTCTTAATGCAACAAAGGCAGCTGTAGAGGAAGGTATTGTTGTAGGAGGAGGGTGCACCTTGTTGCGCCTGTCTACTAAAGTTGATGCCATCAAGGAGACACTTGAAAATGATGAGCAAAAGCTTGGAGCAGATATCGTCAAAAGAGCACTTAGTTATCCTCTGGACCTGATTGCCAAGAATGCAGGAGTGAACGGAGCTATTGTCATTGAGAAGGTGCTATCGAACGATAATCCAAGATTTGGTTACAACGCTGCCACAGGGAAATACGAGGATCTGATGGCTATTGGTATAATCGATCCCACCAAGGTGGTTCGATGTTGCTTAGAGCATGCTGCTTCTGTAGCAAGAACCTTCCTCACATCAGATGCTGTGGTTACTGAGATTCCAGAGCCTGAACCTGCCCCAGCTGCCCAGGCCAACCCAGGTTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48376.p1 GENE.S_Transcript_48376~~S_Transcript_48376.p1 ORF type:complete len:607 (+),score=166.58,Cpn60_TCP1|PF00118.20|7.1e-99 S_Transcript_48376:2638-4458(+)
MASSFTAMSGVGSLLSTGSHSFDKKTLVLSHKLSSLDCISSCSLRTIPNGIVHRKRCSLKVKAATKKLHFNKNGSAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKAVELEDPVENIGARLVLQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVIAGANPIQIAKGIENTAKALVSELRLMSKEVEDSELADVAAVSAGNNYEIGNMISDAMQKVGRKGVVTLEEGTGAVSTLYVVEGMQFDRGYISPYFVTDSDKMIVEYENCKLLLVDKKVTNARDLVGVLEDAIKNNYPILVIAEDIEQEPLATLVVNKLRGSLRIAAMKAPGYGDDRRRQYLDDIAILTGGIVVRDEVGLSLDKVGSEVLGTAAKVVLNKETATFVGDGSTQDAVAKRIVQIKKQVEETDQEYEKTKLNERIAKLSSGVAVIQVGAQTETEMKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLSTKVDAIKETLENDEQKLGADIVKRALSYPLDLIAKNAGVNGAIVIEKVLSNDNPRFGYNAATGKYEDLMAIGIIDPTKVVRCCLEHAASVARTFLTSDAVVTEIPEPEPAPAAQANPGY*

Click here to download the sequence:
Link to NCBI Protein BLAST