Transcript Information: S_Transcript_48398.p1


Annotated TAIR IDAT1G54510.1
Annotated Gene NameNIMA-related serine/threonine kinase 1
Annotated Gene Symbol(s)ATNEK1, NEK1
Annotation TypeOrtholog
Chromosome Positionchr1:20358603-20362006 | Reverse length=612
E-Value9.9E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.303180172228
Replicate 216.474517202486
Replicate 310.222371809496
Condition 2: 8 Hour
Replicate 19.9962767111561
Replicate 28.9781760988377
Replicate 39.6762729259455
Condition 3: 24 Hour
Replicate 18.8744839180539
Replicate 211.331905788174
Replicate 39.6242011545838


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48398.p1 GENE.S_Transcript_48398~~S_Transcript_48398.p1 ORF type:complete len:608 (+),score=120.62,Pkinase|PF00069.21|1.3e-62,Pkinase_Tyr|PF07714.13|4.4e-37,Kinase-like|PF14531.2|1.1e-05 S_Transcript_48398:486-2309(+)
ATGGAGCAGTATGAGATACTAGAGCAAATCGGAAAGGGTGCCTTTGGTTCAGCCCTTCTTGTTAGACACAGACTTGAGAAGAAAAGGTATGTTCTAAAGAAGATAAGACTTGCTCGTCAGACTGACAGGACCCGTCGATCTGCTCACCAAGAGATGGAGCTGATTTCGAAGATAAGAAATCCTTTCATTGTGGAGTACAAAGACTCCTGGGTAGAGAGGGGTTGCTATGTCTGCATTATAATTGGTTATTGTGAAGGAGGTGACATGGCAGAGGCCATTAAAAAAGCAAACTGTATCCACTTTCCTGAAGAGAAACTGTGCAAGTGGTTGGTTCAGCTTCTGATGGCACTTGATTACTTGCATCTGAACCATATCCTTCATCGAGATGTTAAGTGTTCGAATATATTTTTGACCAAAGATCAGGACATACGTCTTGGTGACTTTGGTCTTGCCAAATTATTAACTTCAGATGATCTTGCTTCCTCTGTGGTTGGAACTCCTAGTTATATGTGCCCCGAACTTCTTGCTGATATTCCTTACGGCACAAAGTCTGACATTTGGTCCTTAGGTTGCTGCATCTATGAAATGGCTGCTCTGAGGCCAGCATTCAAGGCATTTGACATGCAGGCACTAATCAATAAAATAAACAAGTCAATTGTTTCTCCACTTCCTACCATGTACTCTGGTGGATTTCGTGGCCTTGTTAAAAGCATGCTGAGGAAAAATCCAGAAATGAGACCCAGTGCTGCGGAGCTGCTTAAGCACCCTCATCTTCAGCCTTATGTTTTCAAAATTAATTTGAAGTTTGATAGCCCGAGAAGAAACACTTTCCCAATATCTCATTCTGATTATCCAAAGAAAACTCGATTCCTAGAGGCTGAGATTCCCAAGCTTGTTGACAGAGAGAGAAGGCGATCATCATACAGTAATGACAGGACCCAGAATCCAAGTATATCTGAAGCTGAATTGGACTCCCCCTATTCTTTTAGAAAACAGAAGGCCTTTTCAAGTTATTACTTAAACCAGAGGCTTGAAGAAATGTCTGTCGGCAGTATACATAAGGAGATTGGTGTTGATAAGCCAGTGATTGCCAAGGCATCTACATTTGCCAGAACCCTGAGGTTGTCAACACCTGCAAAAGGTTCTGCTGCTTCGAGGAGACTGTCAACACCTTCAAAGATCCCCACTATTACTTCTAACCGTGTCTCTCATCCTGTTTCAAATACTCCAACCACCAAATCTTCCAGGACTGCACGTAGAGCTTCCCTACCACTATCAATCTCAAGCACCAAGACTGCAAACCACGATTCTCAATATAGATCAAATGTTGGTTTCCTTCACAGTGTCGAATCCCCTGATGTATCTGTCAACGCCCCACGTATTGATAAAATGGCAGAATTCCCATTAGCATCTTCCGAGGAACCCCTTTACCCTGCTCATAGAACTTCATCAACCTCTGCTCAGTGCTCTTCCACTTCACCAAATGTTGGTGACCGTTCAATCACAAAGGACAAGTGTACGGTCCAGATTGTAGGCAAACCCTTGGCCAAGCCAATTGCAGTCAGTGAATCCTCAGAGCACAATCAAGTCAGTGGTGTTTCCAGTTGGTCGTCCTCAGACTCCCGCAAACGCCGTTTTGATACTAAATCATATCAGCAACGTGCTGAGGCATTGGAAGGCTTGCTGGAATTCAGTGCCCGACTTCTGCAGCAGGAGAGATATGATGAGCTCGGTGTGCTGTTAAAGCCCTTCGGCCCTGAGAAGGTGTCTCCAAGAGAAACAGCTATTTGGTTAGCCAAAAGCTTCAAAGAGACCGGAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48398.p1 GENE.S_Transcript_48398~~S_Transcript_48398.p1 ORF type:complete len:608 (+),score=120.62,Pkinase|PF00069.21|1.3e-62,Pkinase_Tyr|PF07714.13|4.4e-37,Kinase-like|PF14531.2|1.1e-05 S_Transcript_48398:486-2309(+)
MEQYEILEQIGKGAFGSALLVRHRLEKKRYVLKKIRLARQTDRTRRSAHQEMELISKIRNPFIVEYKDSWVERGCYVCIIIGYCEGGDMAEAIKKANCIHFPEEKLCKWLVQLLMALDYLHLNHILHRDVKCSNIFLTKDQDIRLGDFGLAKLLTSDDLASSVVGTPSYMCPELLADIPYGTKSDIWSLGCCIYEMAALRPAFKAFDMQALINKINKSIVSPLPTMYSGGFRGLVKSMLRKNPEMRPSAAELLKHPHLQPYVFKINLKFDSPRRNTFPISHSDYPKKTRFLEAEIPKLVDRERRRSSYSNDRTQNPSISEAELDSPYSFRKQKAFSSYYLNQRLEEMSVGSIHKEIGVDKPVIAKASTFARTLRLSTPAKGSAASRRLSTPSKIPTITSNRVSHPVSNTPTTKSSRTARRASLPLSISSTKTANHDSQYRSNVGFLHSVESPDVSVNAPRIDKMAEFPLASSEEPLYPAHRTSSTSAQCSSTSPNVGDRSITKDKCTVQIVGKPLAKPIAVSESSEHNQVSGVSSWSSSDSRKRRFDTKSYQQRAEALEGLLEFSARLLQQERYDELGVLLKPFGPEKVSPRETAIWLAKSFKETGA*

Click here to download the sequence:
Link to NCBI Protein BLAST