Transcript Information: S_Transcript_48427.p1


Annotated TAIR IDAT5G04760.1
Annotated Gene NameDuplicated homeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1373752-1374529 | Reverse length=215
E-Value2.2E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.873908887858
Replicate 226.383691963438
Replicate 327.198931256823
Condition 2: 8 Hour
Replicate 119.616827888164
Replicate 215.335006040881
Replicate 316.951475246691
Condition 3: 24 Hour
Replicate 110.306636424346
Replicate 29.4824849622106
Replicate 39.1308291318225


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48427.p1 GENE.S_Transcript_48427~~S_Transcript_48427.p1 ORF type:complete len:337 (+),score=49.10,Myb_DNA-binding|PF00249.27|8.1e-10,Myb_DNA-binding|PF00249.27|3.7e-12,Myb_DNA-bind_6|PF13921.2|0.83,Myb_DNA-bind_6|PF13921.2|0.00093 S_Transcript_48427:536-1546(+)
ATGGGTTCCCAGATATCTGATCTGGTGAGATTAGAAGTCCTAAAATTTGTTGAGATTTCTGGGGCCTCATCCCCGCAAGCTCACAATCCCCCCCCCCCAAAAAAAAAAATCCCATTTTTCCATTTTCTTTCTTTATTACTACTAAACCCTTTTTCCTTACCAACTCAAAATCAAGTTCAAGTCAAGAAGTCTCGTAAGAAAAGAATCACAATTTTGACAATTTTGTTGAAAACCCAGAAAAATCCATATCTTAATTTCTGTATTTATTGTGAGGGGAAGAAGATTTGGGGGTGGATGAGAGGGGAAAATTGGAGCAGAGTAGAGGATAAGTTGTTTGAAGAAGCCCTTGTGATATTTGGAGAAGAATCAGGGGATGATCGGTGGCATAAGATAGCTGGTCACGTGCCAGGGAGGTCGGTGTCCGAGGTTAGACAACACTACGAGGATCTCCTCCATGATGTTTCTCAGATCGACTCGGGCCGAGTTCAACTCCCCTGTTACTCGGATGACTCGTCTGGGTCATGGTGGGTTGGGCCCGAGTCCAACTCAGCTGCTCGGTCTAATCAGATTTCATTTGGGTCTAACGGTGGTGGTGCCAAAACTACTAAGCATAGTGAGGTTGAGCGGAAGAAGGGCACCCCTTGGACTGAGGAAGAACACAGGCTCTTCCTGATTGGGCTCGAGAAATATGGCAAGGGTGATTGGAGGAGTATATCAAGGAATGTAGTGGTGACAAGAACGCCAACCCAGGTGGCTAGCCACGCTCAAAAATATTACCTTCGCCAAAACTCGGGCAAGAAAGAGAGGAAGAGATCTAGCATCCATGACATAACCACAGTTGACGATAAATCTGCAGCACGCCCTGCTGTTGAACAAAATTGGATTCCCCCACCTGGTGGAAACCCGATCCCGGAACATCCCTCACTGCAGCATATGGGGACATCACCACAATTCGGTACCACTCAAGGAGGAGCCTCCTTTGGGTATCAGAATTTTGGTTTTCCAATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48427.p1 GENE.S_Transcript_48427~~S_Transcript_48427.p1 ORF type:complete len:337 (+),score=49.10,Myb_DNA-binding|PF00249.27|8.1e-10,Myb_DNA-binding|PF00249.27|3.7e-12,Myb_DNA-bind_6|PF13921.2|0.83,Myb_DNA-bind_6|PF13921.2|0.00093 S_Transcript_48427:536-1546(+)
MGSQISDLVRLEVLKFVEISGASSPQAHNPPPPKKKIPFFHFLSLLLLNPFSLPTQNQVQVKKSRKKRITILTILLKTQKNPYLNFCIYCEGKKIWGWMRGENWSRVEDKLFEEALVIFGEESGDDRWHKIAGHVPGRSVSEVRQHYEDLLHDVSQIDSGRVQLPCYSDDSSGSWWVGPESNSAARSNQISFGSNGGGAKTTKHSEVERKKGTPWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLRQNSGKKERKRSSIHDITTVDDKSAARPAVEQNWIPPPGGNPIPEHPSLQHMGTSPQFGTTQGGASFGYQNFGFPM*

Click here to download the sequence:
Link to NCBI Protein BLAST