Transcript Information: S_Transcript_48441.p2


Annotated TAIR IDAT1G78610.1
Annotated Gene Namemechanosensitive channel of small conductance-like 6
Annotated Gene Symbol(s)MSL6
Annotation TypeOrtholog
Chromosome Positionchr1:29569226-29572126 | Reverse length=856
E-Value1.2E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.634455131853
Replicate 213.482815840704
Replicate 312.481447652538
Condition 2: 8 Hour
Replicate 115.940190742099
Replicate 213.332717876201
Replicate 316.794304173622
Condition 3: 24 Hour
Replicate 111.474080217282
Replicate 216.482772055525
Replicate 318.088536896598


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48441.p2 GENE.S_Transcript_48441~~S_Transcript_48441.p2 ORF type:complete len:198 (+),score=14.18,MS_channel|PF00924.14|5.4e-20 S_Transcript_48441:3031-3624(+)
ATGTTTGGAAACACTTGCAAAACAACCTTTGAAGCAATCATATTTTTGTTTGTTATGCATCCATTTGACGTTGGTGATCGTTGTGAAATTGAGGGAGTTCAGATGATCGTGGAGGAGATGAATATATTGACTACTGTTTTTCTGAGATACGACAACCAAAAGATCATTTATCCTAACAGTGTGCTAGCAACCAAGCCTATCGCTAACTACTATAGGAGTCCGGATATGGGAGATTTCATTGATTTCGTTGTCCACATCTCGACTCCCGTGGAAAAGATGGCTATCATGAAGGAAAGAATAACAAGGTATGTCGATAACAAGAAAGAGCACTGGTACCCAGCACCAATGATAGTCATGAGAGATGTAGAAGACATGAACAGGATTAAGTTTTCAGTATGGGTATCGCATACAATGAACCATCAAGACATGGGAGAGAGGTGGGCACGGCGAGCCCTTCTTGTTGAGCAAATGATCAAGATCTTCAAGGATCTCGATATCGAGTACCGCATGTTGCCCATGGACGTTAACGTCAGAGCATTGCCGGCTTTAGTTTCTGACAGGCTTCCGTCTAACTGGACTGCCACCTTGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48441.p2 GENE.S_Transcript_48441~~S_Transcript_48441.p2 ORF type:complete len:198 (+),score=14.18,MS_channel|PF00924.14|5.4e-20 S_Transcript_48441:3031-3624(+)
MFGNTCKTTFEAIIFLFVMHPFDVGDRCEIEGVQMIVEEMNILTTVFLRYDNQKIIYPNSVLATKPIANYYRSPDMGDFIDFVVHISTPVEKMAIMKERITRYVDNKKEHWYPAPMIVMRDVEDMNRIKFSVWVSHTMNHQDMGERWARRALLVEQMIKIFKDLDIEYRMLPMDVNVRALPALVSDRLPSNWTATLR*

Click here to download the sequence:
Link to NCBI Protein BLAST