Transcript Information: S_Transcript_48445.p1


Annotated TAIR IDAT1G78610.1
Annotated Gene Namemechanosensitive channel of small conductance-like 6
Annotated Gene Symbol(s)MSL6
Annotation TypeOrtholog
Chromosome Positionchr1:29569226-29572126 | Reverse length=856
E-Value3.6E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6445757590688
Replicate 211.29374958097
Replicate 310.798295079526
Condition 2: 8 Hour
Replicate 113.911013389206
Replicate 214.314942787594
Replicate 316.270533732455
Condition 3: 24 Hour
Replicate 113.730362782876
Replicate 214.732760866165
Replicate 316.738525505547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48445.p1 GENE.S_Transcript_48445~~S_Transcript_48445.p1 ORF type:3prime_partial len:883 (+),score=208.00,MS_channel|PF00924.14|3.4e-22 S_Transcript_48445:300-2945(+)
ATGGAAGGTTTTAAAGTAGCCAGCCCATTGAGAAAAGGAGGGTCTCCTTCACCTTCTCGCAAAGACAAAAAGAAGCAACAAGAAGAGGAAAAGCTCATACTACTCCAAAACAGGAACGACCCAATGGCTCAATCCTTCAACAAAGATGACCCAAAATCTGAACTTTCTCTTAAAATAGACAATTTCAGCAAAACCCCATCTCCTTCTTCAACTTCTCCTTCAACATTGCCAGAGATTTCACCAACTGTGGGGGGCCAACCTCAAAAACAACAACACAAAAATATCTGGAGAGATACAAGCTATGACTTCAGGAATGATGCTGTTCCAATCCCACCAAGAAAAAGCACTCAAAGTCACCCATCAAACGACTCTGATGACGACGATGATGATGATGGTGATTCATCAGATTCTAAGGAGTTTGATTTTCCAAAGCAAAACAAGGATGAACAACAAGAACAAGACTTGGAGAACCAGTGTATGTCTCCTGTTTCAGAGAGCCCCAACAATGAGTATGGTAAGATTACTCCAAGAGCTGCTAATGTTGGTAATAGAGTTTCTTTTAAGGAATGTGAACTTGTTCAAAGACATAGGAGTTCTAACTTTGGTGCTCATAATAACAATAATAATTATGGTGTTGGTGTTAGTGGAGGAGGAGATGATGAACAAGTTGTTATTCAGTGTAGTGCAAGTGCTTCTTTTAATAGACAGCAAAAATCTGGGATTTTGAGAACTAAGACTAAGTCAAGGTTGATGGACCCACCTGAGGATGTGGGAGTTGGTGTTCAAGGTCCTGATAAGAGATCAAGTAGAACTATGAGGTCAGGGTTTTTGGGTAGGAGTGAAGAGATTGAAGAAGATGATCCTTTTTTGGATGATGATATTCCTGAAGAGTATAAGAAGGTTAAATTTAGTTGCTTTTCTATTATTCAATGGGTTACTTTGGTTTTAGTTATTGCTGCTGCTGTTTGTAGTGTTGCTATTCCTGTTTTGATGGGGAAAACTATTTGGGGTATGCAAATTTGGAAGTGGGCTGTTATGGTTTTGGTTTTAATTTGTGGGGGTTTGGTTTCTGGTTGGTTGATTAGGATTGTTGTGTTCTTTATTGAGAGGAATTTCTTGCTTAGGAAGAGGGTTTTGTATTTTGTGTATGGGTTAAGGAGTTCTGTTCAGAAGTTTTTGTGGTTAGGTTGGGTTTTACTTGCTTGGAATTTGATTCTTGATAAGAAGGTTGAGAAGGAGACTAATAGTAAGGTTTTGCCTTATGTCACCAAGATTTTGATTTGTTTTATGGTGGCTACATTGATGTGGTTGGTCAAGACTTTACTCCTCAAGGTGCTTGCTATGAATTTCCATGTCAGCGCCTTCTTCGATAGGATTCAGGATGCTTTGTTTAATCAGTATGTGATCGAGACGCTCTCTGCACCGCCTTACATTGAGCTCCAGCGTATCCAGGATGAGGAGGATAGAGTTATGACTGAGGTTCAGAAGCTTCAGAGTGCTGGGATTCATGTCCCAGCTGATCTTAGGGCGAATTGCTTGCCTAATAATGGGAAAACATCGGGGAGTGGGAGGTCGACTGCTAGTGGTTTGCAAAGGAGCCCCTTCATTGGTAAGAGTCCTAAGAGTTCTGTCTTTGGTAAGAGCCCTAAGTTTTCAAGGGCGCCGTCTAAGAGAGAAGAGGAACAAGAGGATGGGGGGATTAGTATTGATCACTTGCACCGGCTTAATCAGAAGAATGTGTCTGCCTGGAACATGAAGAGGTTGATGAATACAGTGAGGAAGGGGGTTCTATCAACTCTCGATGAGCAGCTTGACTCAGGCATCGAGGATGACTCAGCATTGCAGATTCGAAGTGAGAAGGAAGCAAAGGCTGCTGCTAAGAGGATATTCACTAATGTGGCCAGACCAGGTTCAAAGCATATTCATTTGGAGGATCTGATGCGATTTTTGAGAGAAGATGAAGCACACAGGGCAATGCAGCTCTTGGAAGGATCCGTTGACAGATCTGGTAATAGCAAAGGAATCAGCAAGCGGGCTCTCAAGAATTGGGTGGTTAATGTATTCAGAGAAAGGAGAGCCCTTGCACTCTCTCTCAACGATACAAAGACAGCTGTGAACAAGCTTCACCATCTGGTGAATATTCTTGTTGGTATTGCCATAATTATTATCTGGCTTCTAATCCTTGGCGTCCCAGTTACTCACTTCCTGGTCTTTGTGAGCTCCCAAGTTGTGGTGCTGGCTTTTATGTTTGGAAACACTTGCAAAACAACCTTTGAAGCAATCATATTTTTGTTTGTTATGCATCCATTTGACGTTGGTGATCGTTGTGAAATTGAGGGAGTTCAGATGATCGTGGAGGAGATGAATATATTGACTACTGTTTTTCTGAGATACGACAACCAAAAGATCATTTATCCTAACAGTGTGCTAGCAACCAAGCCTATCGCTAACTACTATAGGAGTCCGGATATGGGAGATTTCATTGATTTCGTTGTCCACATCTCGACTCCCGTGGAAAAGATGGCTATCATGAAGGAAAGAATAACAAGGTATGTCGATAACAAGAAAGAGCACTGGTACCCAGCACCAATGATAGTCATGAGAGATGTAGAAGACATGAACAGGATTAAGTTTTCAGTATGGGTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48445.p1 GENE.S_Transcript_48445~~S_Transcript_48445.p1 ORF type:3prime_partial len:883 (+),score=208.00,MS_channel|PF00924.14|3.4e-22 S_Transcript_48445:300-2945(+)
MEGFKVASPLRKGGSPSPSRKDKKKQQEEEKLILLQNRNDPMAQSFNKDDPKSELSLKIDNFSKTPSPSSTSPSTLPEISPTVGGQPQKQQHKNIWRDTSYDFRNDAVPIPPRKSTQSHPSNDSDDDDDDDGDSSDSKEFDFPKQNKDEQQEQDLENQCMSPVSESPNNEYGKITPRAANVGNRVSFKECELVQRHRSSNFGAHNNNNNYGVGVSGGGDDEQVVIQCSASASFNRQQKSGILRTKTKSRLMDPPEDVGVGVQGPDKRSSRTMRSGFLGRSEEIEEDDPFLDDDIPEEYKKVKFSCFSIIQWVTLVLVIAAAVCSVAIPVLMGKTIWGMQIWKWAVMVLVLICGGLVSGWLIRIVVFFIERNFLLRKRVLYFVYGLRSSVQKFLWLGWVLLAWNLILDKKVEKETNSKVLPYVTKILICFMVATLMWLVKTLLLKVLAMNFHVSAFFDRIQDALFNQYVIETLSAPPYIELQRIQDEEDRVMTEVQKLQSAGIHVPADLRANCLPNNGKTSGSGRSTASGLQRSPFIGKSPKSSVFGKSPKFSRAPSKREEEQEDGGISIDHLHRLNQKNVSAWNMKRLMNTVRKGVLSTLDEQLDSGIEDDSALQIRSEKEAKAAAKRIFTNVARPGSKHIHLEDLMRFLREDEAHRAMQLLEGSVDRSGNSKGISKRALKNWVVNVFRERRALALSLNDTKTAVNKLHHLVNILVGIAIIIIWLLILGVPVTHFLVFVSSQVVVLAFMFGNTCKTTFEAIIFLFVMHPFDVGDRCEIEGVQMIVEEMNILTTVFLRYDNQKIIYPNSVLATKPIANYYRSPDMGDFIDFVVHISTPVEKMAIMKERITRYVDNKKEHWYPAPMIVMRDVEDMNRIKFSVWV

Click here to download the sequence:
Link to NCBI Protein BLAST