Transcript Information: S_Transcript_484606.p2


Annotated TAIR IDAT3G54890.1
Annotated Gene Namephotosystem I light harvesting complex gene 1
Annotated Gene Symbol(s)LHCA1
Annotation TypeHomolog
Chromosome Positionchr3:20339706-20340922 | Reverse length=241
E-Value7E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57854350511262
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.24634577800378
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_484606.p2 GENE.S_Transcript_484606~~S_Transcript_484606.p2 ORF type:complete len:92 (+),score=-5.87,Chloroa_b-bind|PF00504.17|9.6e-17 S_Transcript_484606:2-277(+)
ATGAAGCGCGCGTACCCAGGTGGTGCGTTCGACCCAATGGGCTTTGGCAAGGACGGCAGCAAGCTCGACAACATGAAGCTGAAGGAGGTCAAGAACGGCCGCCTAGCAATGCTTGCGTTCCTCGGGTTCGTTGCACAGCACGCAGCAACGGGCAAGGCGCCGCTGGAGGCGCTCGGCGCGCACCTCGCAAACCCTGCGCAGAACAACTTCGCCACCAACGGCGTCAGCCTGCCGCCCAGCGCATTCCCGTTCTTGTTCCCGGGCGAGCGATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_484606.p2 GENE.S_Transcript_484606~~S_Transcript_484606.p2 ORF type:complete len:92 (+),score=-5.87,Chloroa_b-bind|PF00504.17|9.6e-17 S_Transcript_484606:2-277(+)
MKRAYPGGAFDPMGFGKDGSKLDNMKLKEVKNGRLAMLAFLGFVAQHAATGKAPLEALGAHLANPAQNNFATNGVSLPPSAFPFLFPGERF*

Click here to download the sequence:
Link to NCBI Protein BLAST