Transcript Information: S_Transcript_48479.p1


Annotated TAIR IDAT4G32980.1
Annotated Gene Namehomeobox gene 1
Annotated Gene Symbol(s)ATH1
Annotation TypeOrtholog
Chromosome Positionchr4:15914865-15916873 | Reverse length=473
E-Value6.6E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1204485779617
Replicate 28.2202309071936
Replicate 38.232785527653
Condition 2: 8 Hour
Replicate 15.9591160991637
Replicate 26.4481250912393
Replicate 36.6682264915407
Condition 3: 24 Hour
Replicate 18.1390427065131
Replicate 29.4399355774944
Replicate 39.0427013332929


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48479.p1 GENE.S_Transcript_48479~~S_Transcript_48479.p1 ORF type:complete len:569 (+),score=86.53,POX|PF07526.7|1.1e+04,POX|PF07526.7|6.7e-26,Homeobox_KN|PF05920.7|2.6e-14,Homeobox|PF00046.25|6.8e-06 S_Transcript_48479:2623-4329(+)
ATGGAGAGTGAGCTACAAATACAACCAGATATTTCCAACAGTGTAACTGTGGTCCATGAAGAAATCCCCCATCAAGTGTTGTCAGAATCCATTCTTAGGTCCACTTTATTCCAACTTAATACCCAGAATGAGAATACCATCACATTTCCTATGCTTTCATCTATGCAAGGAGAGCCCTTCAAAGATTTTCATGCTGATAAATCTGTCAGCTACAATGGTTTGCTCAATAGAGAGGATTTGAATTTGCATGAGCTTCGCTTGGGCGGTACATCTCTTGCCTCTGGTTCGTTGGGTACCTTAGCCAGCAGAAATGGCCTCAATGATGATGTGAATAATCTGGTTGTTCCTATGCATCAAGAGATTCCGATGAGAGAAATGTACTCGAGTGGCTGTGCTTATGCCTCGAGTTCCTCAGTTCCAAACACTATGAACTGTGATTACGAAGCCTTAGCTGGTGATGCCAATGGTAAATGGTATGAGAACAGATTTCTGAGACAGGCAGAACTGTGCTGGAGAACATCGGCATCTGGATTGGCGCCATTACAATTCCCTGAGAATCACACTGCAGATCAGTGGATGTTGCCAAACTCCACAAATGTGTGCTCGGATCATCCGTATGGAATGCCCATTTCTCAAAATGAGCTGTCACTGAGTCTCGCAACTTGCAGGCCTTCTCTTCCCTGTTCTGCCAGCATTCAGGATCGCTGTTCTAATATGAGCAGTTCCAGCGTTATCCACAATTCTCAATCTCAAAGAAGGATAGGTTCAGAATGTAGTTCTCAAGGGAACAAGGAGCTCTCACTTGGTTTTGCTTCAACTAGTAGATCTCCCCAGTTTTCACCAATAATATCCGGTTCAAGATATCTTTGTGCACTTCAGCAAATTCTTTCAGAACTTGCAAACTATTCACTGTTAGGTATTGACCAGAGCAGCTTTTCCACTGGTTTAGGAAGCTCAAGCTCGAGCCATCTTTTCACTTCAAATCACTTCATTGATCAAGGGGTTTCATGTAAGCCCTTCAATGAGTTCAGCAATGATGATGGATCATTACATCCTATGGAAAATTCATATCGAAGAAGGGAAATTGAGTCCAAAAGGTCACAGCTGTTGGCTCTACTGCAAGTGGTGGATGATTGCTATAATCAATGCTTAGATGAGATGCACACTGTAATTTCTGCATTCCATGCTGCAACTGAGCTGGACCCTCAGCTACATACTTGTTTTGCTCTTCGAACAGTCTCATTCTTCTACAAAAACCTGAGAGAGAGGATCAGCAATCATATCCTCGCAATGGGAGTAGATAGTGGAAGCACGAGAGACAATGTGAGATCTTTCGAGAAATCTTTCATTCAAAAACAGTGGGCACTCCAGCAATTAAAGAGAAAAGATCAACAATTGTGGAGACCACAAAGAGGCTTACCAGAAAGATCTGTTTCAGTTTTACGGGCATGGATGTTTGAGAACTTTCTTCACCCGTACCCTAAAGATTCAGAGAAACATTTGCTTGCAATTAAAAGCGGCCTAACAAGAAGTCAGGTTTCAAACTGGTTTATAAACGCCCGGGTGCGTCTCTGGAAACCTTTGGTTGAAGAAATGTGCATTGAGCTCAACCGGAAGAAAGGGCCCCGACAAAACGAAGAGCCAACCAACACCACCCACAGGAGCCAGTTATGCATCTACGACTGCAATCAGAGATTCGACAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48479.p1 GENE.S_Transcript_48479~~S_Transcript_48479.p1 ORF type:complete len:569 (+),score=86.53,POX|PF07526.7|1.1e+04,POX|PF07526.7|6.7e-26,Homeobox_KN|PF05920.7|2.6e-14,Homeobox|PF00046.25|6.8e-06 S_Transcript_48479:2623-4329(+)
MESELQIQPDISNSVTVVHEEIPHQVLSESILRSTLFQLNTQNENTITFPMLSSMQGEPFKDFHADKSVSYNGLLNREDLNLHELRLGGTSLASGSLGTLASRNGLNDDVNNLVVPMHQEIPMREMYSSGCAYASSSSVPNTMNCDYEALAGDANGKWYENRFLRQAELCWRTSASGLAPLQFPENHTADQWMLPNSTNVCSDHPYGMPISQNELSLSLATCRPSLPCSASIQDRCSNMSSSSVIHNSQSQRRIGSECSSQGNKELSLGFASTSRSPQFSPIISGSRYLCALQQILSELANYSLLGIDQSSFSTGLGSSSSSHLFTSNHFIDQGVSCKPFNEFSNDDGSLHPMENSYRRREIESKRSQLLALLQVVDDCYNQCLDEMHTVISAFHAATELDPQLHTCFALRTVSFFYKNLRERISNHILAMGVDSGSTRDNVRSFEKSFIQKQWALQQLKRKDQQLWRPQRGLPERSVSVLRAWMFENFLHPYPKDSEKHLLAIKSGLTRSQVSNWFINARVRLWKPLVEEMCIELNRKKGPRQNEEPTNTTHRSQLCIYDCNQRFDS*

Click here to download the sequence:
Link to NCBI Protein BLAST