Transcript Information: S_Transcript_485005.p1


Annotated TAIR IDAT1G30080.1
Annotated Gene NameGlycosyl hydrolase superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10551231-10553167 | Reverse length=408
E-Value3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4685387541405
Replicate 20.54380115106551
Replicate 30.45457448093382
Condition 2: 8 Hour
Replicate 10.22526820757535
Replicate 20.47264468957169
Replicate 30.30022320570396
Condition 3: 24 Hour
Replicate 10.92302324608144
Replicate 20.47881292062706
Replicate 30.088810015510972


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_485005.p1 GENE.S_Transcript_485005~~S_Transcript_485005.p1 ORF type:3prime_partial len:284 (+),score=47.40,Glyco_hydro_17|PF00332.14|8e-52 S_Transcript_485005:320-1168(+)
ATGGGCCATGAAAGCCTTGAAAAAGCTTCTCTCAATCATAAAAATATGCCCAAAAATTCAAAGTGCTTTATCAGGAGTGATTGCATGTTGGTAATACATATATCAACCCTGGCCCAATTAACATTCCCACTCTTTTTTCTGAAAACACAACCAGAAATGACAACCAACCTTGCTTGCCTTGCTGTCCTGTTTCTCACAATTGGCTTTTGCCGTCAGTCCTCAACAATTGGGATCAACTATGGAACCTTAGGCAGCAACCTCCCCCCACCAAAAAGGGTAGCCCAAGTGCTTCAATCCACTCTCATAGACAAGGTGAAAATCTATGACACCGACCCTGAAATTCTCGAAGCCTTCTCCAATACTGGTATAGATCTGATAGTAGCTGTTGAGAACAGCCATGTTTCCAACATCAGCACCACTGTGTCAGCTGCTGATGAGTGGCTGGCAAGTCGAGTTATTCCGTACGTACCAGCCACCTCCATTGTGGGCATCGCAGTGGGGAATGAGTACTTAAGCATGGATGATGGTGTTGTCAGGAGTACAGCTCTGGTCCAGGCCATGCAGAACTTGCATGCAGCCCTGCAAGCTCGGGGCCTGGACCACAAGATTAAGGTAACTACTCCACATAGCATGGCCGTGCTTGCTTCTTCATTCCCGCCTTCATCCTCCACTTTTGCTGCCACCCTCATCCCCGCCATGACCTCCATTGTCGGATTCCTTGCCACCACCAATTCTCCCTTCATGATCAATGCTTACCCTTACTTTGCCTACAGGGATAACCCAGGAAAGGTTGATCTGGAGTATGCATTGCTAGGCAATGCCAGTACCCCTGTCCAGGAGCCCAAAGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_485005.p1 GENE.S_Transcript_485005~~S_Transcript_485005.p1 ORF type:3prime_partial len:284 (+),score=47.40,Glyco_hydro_17|PF00332.14|8e-52 S_Transcript_485005:320-1168(+)
MGHESLEKASLNHKNMPKNSKCFIRSDCMLVIHISTLAQLTFPLFFLKTQPEMTTNLACLAVLFLTIGFCRQSSTIGINYGTLGSNLPPPKRVAQVLQSTLIDKVKIYDTDPEILEAFSNTGIDLIVAVENSHVSNISTTVSAADEWLASRVIPYVPATSIVGIAVGNEYLSMDDGVVRSTALVQAMQNLHAALQARGLDHKIKVTTPHSMAVLASSFPPSSSTFAATLIPAMTSIVGFLATTNSPFMINAYPYFAYRDNPGKVDLEYALLGNASTPVQEPKG

Click here to download the sequence:
Link to NCBI Protein BLAST