Transcript Information: S_Transcript_485028.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.17372275242138
Replicate 30
Condition 2: 8 Hour
Replicate 10.16791645919002
Replicate 20.35231257700357
Replicate 31.0070479183456
Condition 3: 24 Hour
Replicate 10
Replicate 20.35691041852516
Replicate 30.39719754968687


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_485028.p1 GENE.S_Transcript_485028~~S_Transcript_485028.p1 ORF type:5prime_partial len:127 (+),score=16.52,zf-RVT|PF13966.2|2.3e-16 S_Transcript_485028:1-381(+)
TGGGGAGCAAAGGACAAATCTTTTACTAAGAATGCATATGTGAAGATCAGAAGTGTAGCTAGGAAGGTGGCTTGGGCTAAAACAATCCGGGACCCTATTAATGTCCCTAAACATTCTGTAATTGCTGTCCTAGCACTTAAGAATGGCTTGCCTACAGTGGATAACATTATCAAGAGATGTCTGCATATGGTTAATAGATGTAGCCTATGCGAAAATCATCAAGAAACAGCTCAACATCTTTTCTTTGAATGTGAGATAGCTATAGCTATTTGGCAGAAGATTCTAATTTGGATGGGACTTACTAGAAGAGGTATGAGTCTAAAAAGAGAACTAAGATGGTATGTTTCTCTTGTCAAAGGGAAGCAATGGCAGAAGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_485028.p1 GENE.S_Transcript_485028~~S_Transcript_485028.p1 ORF type:5prime_partial len:127 (+),score=16.52,zf-RVT|PF13966.2|2.3e-16 S_Transcript_485028:1-381(+)
WGAKDKSFTKNAYVKIRSVARKVAWAKTIRDPINVPKHSVIAVLALKNGLPTVDNIIKRCLHMVNRCSLCENHQETAQHLFFECEIAIAIWQKILIWMGLTRRGMSLKRELRWYVSLVKGKQWQKK*

Click here to download the sequence:
Link to NCBI Protein BLAST