Transcript Information: S_Transcript_48506.p1


Annotated TAIR IDAT5G48500.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19653235-19654017 | Forward length=167
E-Value3.5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.872788275899
Replicate 228.068045886779
Replicate 320.625308401186
Condition 2: 8 Hour
Replicate 183.282589404188
Replicate 279.956192771567
Replicate 371.893687188399
Condition 3: 24 Hour
Replicate 121.844883490594
Replicate 218.372438970175
Replicate 317.909143956296


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_48506.p1 GENE.S_Transcript_48506~~S_Transcript_48506.p1 ORF type:complete len:169 (+),score=51.50 S_Transcript_48506:85-591(+)
ATGGAAGATTATGGATGGAACCATTATCATAATCATCATCATAATCATGTGCCAGCATTTGGGAGCTGGGATTATGGGGATGACTTGCCTTATACGCAGTGTTTTGAGAGTGCCCGCCAAGCTGGTCTTGTTCGTTATGGTAGTTATGGTGAGACTGAAGAGAGAGAGTTGTATGTTACTGGTGATCTCTACCAAAACCACATCGTTACTCCTGCTGTCATCCTTGTTCCTCGCCGTAGGAGAAAAGGAGGATTAGGGTACCCAAATGTCAAAGAGCAGAAAAAGCAACAGCTAAAGATGCAAAAGCAAGAAGAATGGGGATATTCATCATCATATGACAACATGAAGGAACCTCCAAGCCCTGTTCTCTCTCCTCCTCCCAAGTCCAAAACCAAGGCTGTTGATGAAGACTTGTACAAGATCCCCCCTGAATTTCTCCATGTCAAACCCAAAAGAAAGAGGGGATTGGGGCTCTTTTCAAGCTGTTTGCTGCCTGCTTGTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_48506.p1 GENE.S_Transcript_48506~~S_Transcript_48506.p1 ORF type:complete len:169 (+),score=51.50 S_Transcript_48506:85-591(+)
MEDYGWNHYHNHHHNHVPAFGSWDYGDDLPYTQCFESARQAGLVRYGSYGETEERELYVTGDLYQNHIVTPAVILVPRRRRKGGLGYPNVKEQKKQQLKMQKQEEWGYSSSYDNMKEPPSPVLSPPPKSKTKAVDEDLYKIPPEFLHVKPKRKRGLGLFSSCLLPACA*

Click here to download the sequence:
Link to NCBI Protein BLAST